Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.43■□□□□ 0.7
RFC3P40938 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC3P40938 AL034346.1-201ENST00000568244 1277 ntBASIC19.43■□□□□ 0.7
RFC3P40938 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.43■□□□□ 0.7
RFC3P40938 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RFC3P40938 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC3P40938 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RFC3P40938 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC3P40938 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RFC3P40938 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.42■□□□□ 0.7
RFC3P40938 CROCCP5-201ENST00000436658 830 ntBASIC19.42■□□□□ 0.7
RFC3P40938 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.42■□□□□ 0.7
RFC3P40938 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.42■□□□□ 0.7
RFC3P40938 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC3P40938 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC3P40938 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RFC3P40938 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RFC3P40938 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RFC3P40938 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 MIR663A-201ENST00000385250 93 ntBASIC19.41■□□□□ 0.7
RFC3P40938 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.41■□□□□ 0.7
RFC3P40938 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
RFC3P40938 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.41■□□□□ 0.7
RFC3P40938 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RFC3P40938 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
RFC3P40938 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.41■□□□□ 0.7
RFC3P40938 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC3P40938 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC3P40938 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RFC3P40938 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RFC3P40938 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC3P40938 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RFC3P40938 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.4■□□□□ 0.7
RFC3P40938 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.4■□□□□ 0.7
RFC3P40938 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC3P40938 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC3P40938 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFC3P40938 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC3P40938 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC3P40938 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC3P40938 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC3P40938 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC3P40938 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFC3P40938 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC3P40938 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC3P40938 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.39■□□□□ 0.69
RFC3P40938 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC3P40938 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC3P40938 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.39■□□□□ 0.69
RFC3P40938 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC3P40938 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC3P40938 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC3P40938 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC3P40938 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC3P40938 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC3P40938 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC3P40938 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC3P40938 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms