Protein–RNA interactions for Protein: P30939

HTR1F, 5-hydroxytryptamine receptor 1F, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1FP30939 LINC01006-201ENST00000333319 2292 ntBASIC19.03■□□□□ 0.64
HTR1FP30939 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1FP30939 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HTR1FP30939 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HTR1FP30939 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 FEM1AP1-201ENST00000431297 1995 ntBASIC19.02■□□□□ 0.64
HTR1FP30939 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1FP30939 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTR1FP30939 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HTR1FP30939 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.02■□□□□ 0.63
HTR1FP30939 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTR1FP30939 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HTR1FP30939 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
HTR1FP30939 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.01■□□□□ 0.63
HTR1FP30939 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.01■□□□□ 0.63
HTR1FP30939 AC099791.2-201ENST00000605725 427 ntBASIC19.01■□□□□ 0.63
HTR1FP30939 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
HTR1FP30939 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
HTR1FP30939 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.01■□□□□ 0.63
HTR1FP30939 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1FP30939 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19■□□□□ 0.63
HTR1FP30939 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19■□□□□ 0.63
HTR1FP30939 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19■□□□□ 0.63
HTR1FP30939 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19■□□□□ 0.63
HTR1FP30939 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HTR1FP30939 MIR3181-201ENST00000578512 73 ntBASIC19■□□□□ 0.63
HTR1FP30939 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19■□□□□ 0.63
HTR1FP30939 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HTR1FP30939 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HTR1FP30939 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1FP30939 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 AC003102.1-202ENST00000563394 1796 ntBASIC18.99■□□□□ 0.63
HTR1FP30939 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.99■□□□□ 0.63
HTR1FP30939 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.99■□□□□ 0.63
HTR1FP30939 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.99■□□□□ 0.63
HTR1FP30939 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.99■□□□□ 0.63
HTR1FP30939 UNC93B8-201ENST00000511903 705 ntBASIC18.99■□□□□ 0.63
HTR1FP30939 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.99■□□□□ 0.63
HTR1FP30939 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HTR1FP30939 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HTR1FP30939 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.99■□□□□ 0.63
HTR1FP30939 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1FP30939 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HTR1FP30939 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.98■□□□□ 0.63
HTR1FP30939 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.98■□□□□ 0.63
HTR1FP30939 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.98■□□□□ 0.63
HTR1FP30939 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HTR1FP30939 AC009299.2-201ENST00000482477 511 ntBASIC18.98■□□□□ 0.63
HTR1FP30939 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.98■□□□□ 0.63
HTR1FP30939 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.98■□□□□ 0.63
HTR1FP30939 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1FP30939 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HTR1FP30939 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.97■□□□□ 0.63
HTR1FP30939 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.97■□□□□ 0.63
HTR1FP30939 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1FP30939 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.97■□□□□ 0.63
HTR1FP30939 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1FP30939 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1FP30939 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1FP30939 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.97■□□□□ 0.63
HTR1FP30939 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HTR1FP30939 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms