Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.32■□□□□ 0.84
HTR1EP28566 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1EP28566 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1EP28566 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1EP28566 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 IRS3P-201ENST00000223076 1006 ntBASIC20.31■□□□□ 0.84
HTR1EP28566 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 LINC01521-201ENST00000504184 1943 ntBASIC20.31■□□□□ 0.84
HTR1EP28566 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1EP28566 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HTR1EP28566 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HTR1EP28566 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 SERBP1P1-201ENST00000396021 1160 ntBASIC20.3■□□□□ 0.84
HTR1EP28566 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 AC008764.7-201ENST00000593779 1081 ntBASIC20.3■□□□□ 0.84
HTR1EP28566 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.3■□□□□ 0.84
HTR1EP28566 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1EP28566 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
HTR1EP28566 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HTR1EP28566 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.29■□□□□ 0.84
HTR1EP28566 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HTR1EP28566 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HTR1EP28566 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.29■□□□□ 0.84
HTR1EP28566 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1EP28566 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HTR1EP28566 C17orf82-201ENST00000623772 1530 ntBASIC20.28■□□□□ 0.84
HTR1EP28566 AL157384.1-201ENST00000445995 2473 ntBASIC20.28■□□□□ 0.84
HTR1EP28566 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1EP28566 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.28■□□□□ 0.84
HTR1EP28566 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1EP28566 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1EP28566 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1EP28566 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.27■□□□□ 0.84
HTR1EP28566 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.27■□□□□ 0.84
HTR1EP28566 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR1EP28566 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR1EP28566 AL499627.2-201ENST00000606283 725 ntBASIC20.27■□□□□ 0.84
HTR1EP28566 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.27■□□□□ 0.84
HTR1EP28566 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR1EP28566 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1EP28566 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR1EP28566 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.27■□□□□ 0.83
HTR1EP28566 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HTR1EP28566 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTR1EP28566 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1EP28566 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1EP28566 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1EP28566 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1EP28566 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1EP28566 AC026471.6-201ENST00000622954 1905 ntBASIC20.26■□□□□ 0.83
HTR1EP28566 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.26■□□□□ 0.83
HTR1EP28566 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1EP28566 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1EP28566 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1EP28566 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1EP28566 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HTR1EP28566 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
HTR1EP28566 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
HTR1EP28566 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR1EP28566 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HTR1EP28566 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR1EP28566 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR1EP28566 AC099791.1-201ENST00000416440 715 ntBASIC20.25■□□□□ 0.83
HTR1EP28566 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.25■□□□□ 0.83
HTR1EP28566 AC079089.2-201ENST00000531211 1277 ntBASIC20.25■□□□□ 0.83
HTR1EP28566 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.25■□□□□ 0.83
HTR1EP28566 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 AC099791.2-201ENST00000605725 427 ntBASIC20.25■□□□□ 0.83
HTR1EP28566 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms