Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
ABCD3P28288 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ABCD3P28288 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ABCD3P28288 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.62■□□□□ 0.73
ABCD3P28288 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCD3P28288 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.62■□□□□ 0.73
ABCD3P28288 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ABCD3P28288 AL162430.1-201ENST00000480705 870 ntBASIC19.62■□□□□ 0.73
ABCD3P28288 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.62■□□□□ 0.73
ABCD3P28288 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.62■□□□□ 0.73
ABCD3P28288 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCD3P28288 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ABCD3P28288 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ABCD3P28288 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD3P28288 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ABCD3P28288 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ABCD3P28288 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ABCD3P28288 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.61■□□□□ 0.73
ABCD3P28288 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
ABCD3P28288 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
ABCD3P28288 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.61■□□□□ 0.73
ABCD3P28288 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.61■□□□□ 0.73
ABCD3P28288 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
ABCD3P28288 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD3P28288 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCD3P28288 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ABCD3P28288 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
ABCD3P28288 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCD3P28288 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.6■□□□□ 0.73
ABCD3P28288 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCD3P28288 KRT18P5-201ENST00000436075 1291 ntBASIC19.6■□□□□ 0.73
ABCD3P28288 NTF6G-201ENST00000591094 616 ntBASIC19.6■□□□□ 0.73
ABCD3P28288 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ABCD3P28288 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.6■□□□□ 0.73
ABCD3P28288 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.6■□□□□ 0.73
ABCD3P28288 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ABCD3P28288 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCD3P28288 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCD3P28288 AC004854.2-201ENST00000608450 1441 ntBASIC19.59■□□□□ 0.73
ABCD3P28288 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCD3P28288 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.59■□□□□ 0.73
ABCD3P28288 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCD3P28288 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCD3P28288 AP004607.4-201ENST00000530158 1459 ntBASIC19.59■□□□□ 0.73
ABCD3P28288 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCD3P28288 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCD3P28288 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCD3P28288 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.58■□□□□ 0.73
ABCD3P28288 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.58■□□□□ 0.73
ABCD3P28288 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCD3P28288 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCD3P28288 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.58■□□□□ 0.73
ABCD3P28288 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
ABCD3P28288 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.58■□□□□ 0.72
ABCD3P28288 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.58■□□□□ 0.72
ABCD3P28288 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCD3P28288 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCD3P28288 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ABCD3P28288 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.58■□□□□ 0.72
ABCD3P28288 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCD3P28288 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
ABCD3P28288 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ABCD3P28288 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms