Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP11P24347 AC005224.4-201ENST00000583262 1652 ntBASIC20.22■□□□□ 0.83
MMP11P24347 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP11P24347 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP11P24347 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP11P24347 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
MMP11P24347 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP11P24347 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP11P24347 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP11P24347 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP11P24347 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP11P24347 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP11P24347 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP11P24347 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP11P24347 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP11P24347 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.2■□□□□ 0.82
MMP11P24347 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP11P24347 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.2■□□□□ 0.82
MMP11P24347 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP11P24347 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
MMP11P24347 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP11P24347 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP11P24347 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MMP11P24347 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP11P24347 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MMP11P24347 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP11P24347 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP11P24347 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP11P24347 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP11P24347 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP11P24347 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
MMP11P24347 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.18■□□□□ 0.82
MMP11P24347 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP11P24347 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP11P24347 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP11P24347 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP11P24347 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP11P24347 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP11P24347 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP11P24347 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP11P24347 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MMP11P24347 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP11P24347 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MMP11P24347 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP11P24347 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP11P24347 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP11P24347 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
MMP11P24347 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.16■□□□□ 0.82
MMP11P24347 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.16■□□□□ 0.82
MMP11P24347 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP11P24347 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP11P24347 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP11P24347 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP11P24347 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP11P24347 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MMP11P24347 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP11P24347 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP11P24347 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MMP11P24347 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP11P24347 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.15■□□□□ 0.82
MMP11P24347 AC080038.1-201ENST00000611274 1154 ntBASIC20.15■□□□□ 0.82
MMP11P24347 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP11P24347 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP11P24347 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP11P24347 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP11P24347 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP11P24347 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
MMP11P24347 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.14■□□□□ 0.82
MMP11P24347 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP11P24347 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP11P24347 KRT87P-202ENST00000534226 1464 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms