Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 GET4-203ENST00000412734 873 ntTSL 216.54■□□□□ 0.243e-6■□□□□ 9.6
SFPQP23246 SDC1-204ENST00000429035 646 ntTSL 316.3■□□□□ 0.25e-6■□□□□ 9.6
SFPQP23246 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.175e-6■□□□□ 9.6
SFPQP23246 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16.04■□□□□ 0.163e-6■□□□□ 9.6
SFPQP23246 SDC1-206ENST00000482879 558 ntTSL 413.44□□□□□ -0.265e-6■□□□□ 9.6
SFPQP23246 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.373e-6■□□□□ 9.6
SFPQP23246 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC10.57□□□□□ -0.723e-6■□□□□ 9.6
SFPQP23246 TBCA-208ENST00000520361 446 ntTSL 2 BASIC10.44□□□□□ -0.743e-6■□□□□ 9.6
SFPQP23246 TMEM135-203ENST00000525018 753 ntTSL 59.61□□□□□ -0.873e-6■□□□□ 9.6
SFPQP23246 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.953e-6■□□□□ 9.6
SFPQP23246 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.46□□□□□ -1.063e-6■□□□□ 9.6
SFPQP23246 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.173e-6■□□□□ 9.6
SFPQP23246 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.22□□□□□ -1.253e-6■□□□□ 9.6
SFPQP23246 TMEM135-206ENST00000529023 1095 ntTSL 26.89□□□□□ -1.313e-6■□□□□ 9.6
SFPQP23246 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.76□□□□□ -1.333e-6■□□□□ 9.6
SFPQP23246 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.96□□□□□ -1.463e-6■□□□□ 9.6
SFPQP23246 PIAS1-203ENST00000562190 766 ntTSL 35.76□□□□□ -1.493e-6■□□□□ 9.6
SFPQP23246 PIAS1-206ENST00000564915 671 ntTSL 55.73□□□□□ -1.493e-6■□□□□ 9.6
SFPQP23246 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.66□□□□□ -1.663e-6■□□□□ 9.6
SFPQP23246 TMEM135-208ENST00000531800 201 ntTSL 53.1□□□□□ -1.913e-6■□□□□ 9.6
SFPQP23246 LIMS1-208ENST00000428064 637 ntTSL 223.55■■□□□ 1.367e-7■□□□□ 9.6
SFPQP23246 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.69■■□□□ 1.229e-9■□□□□ 9.6
SFPQP23246 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.08■□□□□ 0.979e-9■□□□□ 9.6
SFPQP23246 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.95■□□□□ 0.789e-9■□□□□ 9.6
SFPQP23246 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.24■□□□□ 0.679e-9■□□□□ 9.6
SFPQP23246 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.05■□□□□ 0.489e-9■□□□□ 9.6
SFPQP23246 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.379e-9■□□□□ 9.6
SFPQP23246 NAA60-215ENST00000572739 803 ntTSL 417.32■□□□□ 0.369e-9■□□□□ 9.6
SFPQP23246 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.277e-7■□□□□ 9.6
SFPQP23246 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.269e-9■□□□□ 9.6
SFPQP23246 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.199e-9■□□□□ 9.6
SFPQP23246 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.93□□□□□ -0.029e-9■□□□□ 9.6
SFPQP23246 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC13.41□□□□□ -0.269e-9■□□□□ 9.6
SFPQP23246 NAA60-219ENST00000573345 608 ntTSL 413.39□□□□□ -0.279e-9■□□□□ 9.6
SFPQP23246 NAA60-209ENST00000571107 561 ntTSL 413.05□□□□□ -0.329e-9■□□□□ 9.6
SFPQP23246 NAA60-212ENST00000572131 558 ntTSL 513.05□□□□□ -0.329e-9■□□□□ 9.6
SFPQP23246 NAA60-207ENST00000570551 673 ntTSL 312.87□□□□□ -0.359e-9■□□□□ 9.6
SFPQP23246 NAA60-224ENST00000574328 552 ntTSL 412.73□□□□□ -0.379e-9■□□□□ 9.6
SFPQP23246 AC025283.2-202ENST00000575785 560 ntTSL 412.68□□□□□ -0.389e-9■□□□□ 9.6
SFPQP23246 NAA60-230ENST00000575733 700 ntTSL 412.13□□□□□ -0.479e-9■□□□□ 9.6
SFPQP23246 NAA60-233ENST00000576787 570 ntTSL 412.11□□□□□ -0.479e-9■□□□□ 9.6
SFPQP23246 NAA60-220ENST00000573580 758 ntTSL 4 BASIC11.75□□□□□ -0.539e-9■□□□□ 9.6
SFPQP23246 NAA60-221ENST00000573593 565 ntTSL 411.55□□□□□ -0.569e-9■□□□□ 9.6
SFPQP23246 NAA60-227ENST00000574950 584 ntTSL 411.29□□□□□ -0.69e-9■□□□□ 9.6
SFPQP23246 NAA60-206ENST00000570372 398 ntTSL 511.19□□□□□ -0.629e-9■□□□□ 9.6
SFPQP23246 NAA60-218ENST00000573201 657 ntTSL 311.14□□□□□ -0.639e-9■□□□□ 9.6
SFPQP23246 NAA60-210ENST00000571696 626 ntTSL 410.03□□□□□ -0.89e-9■□□□□ 9.6
SFPQP23246 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC9.35□□□□□ -0.919e-9■□□□□ 9.6
SFPQP23246 NAA60-225ENST00000574380 578 ntTSL 49.16□□□□□ -0.949e-9■□□□□ 9.6
SFPQP23246 NAA60-213ENST00000572169 582 ntTSL 27.7□□□□□ -1.189e-9■□□□□ 9.6
SFPQP23246 NAA60-232ENST00000575936 547 ntTSL 47.7□□□□□ -1.189e-9■□□□□ 9.6
SFPQP23246 NAA60-216ENST00000572757 818 ntTSL 27.65□□□□□ -1.189e-9■□□□□ 9.6
SFPQP23246 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.331e-8■□□□□ 9.6
SFPQP23246 SPATS2L-221ENST00000459656 1901 ntTSL 1 (best)22.78■■□□□ 1.241e-8■□□□□ 9.6
SFPQP23246 SPATS2L-225ENST00000471533 329 ntTSL 321.86■■□□□ 1.091e-8■□□□□ 9.6
SFPQP23246 SPATS2L-216ENST00000444012 605 ntTSL 420.81■□□□□ 0.921e-8■□□□□ 9.6
SFPQP23246 SPATS2L-212ENST00000428692 541 ntTSL 420.23■□□□□ 0.831e-8■□□□□ 9.6
SFPQP23246 SPATS2L-220ENST00000457757 835 ntTSL 520.23■□□□□ 0.831e-8■□□□□ 9.6
SFPQP23246 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.811e-8■□□□□ 9.6
SFPQP23246 SPATS2L-211ENST00000423749 771 ntTSL 520.09■□□□□ 0.811e-8■□□□□ 9.6
SFPQP23246 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.98■□□□□ 0.631e-8■□□□□ 9.6
SFPQP23246 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.331e-8■□□□□ 9.6
SFPQP23246 SPATS2L-214ENST00000439084 584 ntTSL 315.7■□□□□ 0.11e-8■□□□□ 9.6
SFPQP23246 SPATS2L-226ENST00000471601 1730 ntTSL 215.66■□□□□ 0.11e-8■□□□□ 9.6
SFPQP23246 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.151e-8■□□□□ 9.6
SFPQP23246 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC12.2□□□□□ -0.461e-8■□□□□ 9.6
SFPQP23246 SPATS2L-219ENST00000453663 637 ntTSL 411.16□□□□□ -0.621e-8■□□□□ 9.6
SFPQP23246 SPATS2L-207ENST00000409397 920 ntTSL 39.98□□□□□ -0.811e-8■□□□□ 9.6
SFPQP23246 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.841e-8■□□□□ 9.6
SFPQP23246 SPATS2L-215ENST00000439395 561 ntTSL 46.27□□□□□ -1.411e-8■□□□□ 9.6
SFPQP23246 AP3D1-209ENST00000591284 580 ntTSL 521.46■■□□□ 1.038e-9■□□□□ 9.6
SFPQP23246 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.748e-9■□□□□ 9.6
SFPQP23246 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.78e-9■□□□□ 9.6
SFPQP23246 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.53e-7■□□□□ 9.5
SFPQP23246 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.53e-7■□□□□ 9.5
SFPQP23246 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.533e-7■□□□□ 9.5
SFPQP23246 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.563e-7■□□□□ 9.5
SFPQP23246 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.613e-7■□□□□ 9.5
SFPQP23246 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.753e-7■□□□□ 9.5
SFPQP23246 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.783e-7■□□□□ 9.5
SFPQP23246 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.813e-7■□□□□ 9.5
SFPQP23246 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.833e-7■□□□□ 9.5
SFPQP23246 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.833e-7■□□□□ 9.5
SFPQP23246 ZMYND8-208ENST00000435836 670 ntTSL 59.76□□□□□ -0.853e-7■□□□□ 9.5
SFPQP23246 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.883e-7■□□□□ 9.5
SFPQP23246 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.42□□□□□ -0.93e-7■□□□□ 9.5
SFPQP23246 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.93e-7■□□□□ 9.5
SFPQP23246 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.943e-7■□□□□ 9.5
SFPQP23246 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.973e-7■□□□□ 9.5
SFPQP23246 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.973e-7■□□□□ 9.5
SFPQP23246 ZMYND8-210ENST00000446894 341 ntTSL 24.09□□□□□ -1.753e-7■□□□□ 9.5
SFPQP23246 ZMYND8-209ENST00000441977 175 ntTSL 30.5□□□□□ -2.333e-7■□□□□ 9.5
SFPQP23246 ATXN2-217ENST00000548492 556 ntTSL 46.02□□□□□ -1.451e-6■□□□□ 9.5
SFPQP23246 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.356e-8■□□□□ 9.5
SFPQP23246 BMP4-203ENST00000558489 605 ntTSL 316.87■□□□□ 0.293e-13■□□□□ 9.5
SFPQP23246 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.9■■□□□ 1.421e-7■□□□□ 9.5
SFPQP23246 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.54■□□□□ 0.41e-7■□□□□ 9.5
SFPQP23246 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.341e-7■□□□□ 9.5
SFPQP23246 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC11.11□□□□□ -0.631e-7■□□□□ 9.5
SFPQP23246 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.771e-7■□□□□ 9.5
Retrieved 100 of 4,991 protein–RNA pairs in 30.8 ms