Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NR4A1P22736 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NR4A1P22736 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 AL512631.2-201ENST00000604634 923 ntBASIC19.61■□□□□ 0.73
NR4A1P22736 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
NR4A1P22736 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR4A1P22736 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.6■□□□□ 0.73
NR4A1P22736 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A1P22736 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.6■□□□□ 0.73
NR4A1P22736 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A1P22736 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.6■□□□□ 0.73
NR4A1P22736 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR4A1P22736 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.59■□□□□ 0.73
NR4A1P22736 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
NR4A1P22736 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.59■□□□□ 0.73
NR4A1P22736 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
NR4A1P22736 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.59■□□□□ 0.73
NR4A1P22736 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NR4A1P22736 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.59■□□□□ 0.73
NR4A1P22736 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.59■□□□□ 0.73
NR4A1P22736 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.59■□□□□ 0.73
NR4A1P22736 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NR4A1P22736 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR4A1P22736 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NR4A1P22736 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NR4A1P22736 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.58■□□□□ 0.73
NR4A1P22736 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NR4A1P22736 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.58■□□□□ 0.73
NR4A1P22736 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.58■□□□□ 0.72
NR4A1P22736 MIR4466-201ENST00000606121 54 ntBASIC19.58■□□□□ 0.72
NR4A1P22736 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NR4A1P22736 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.58■□□□□ 0.72
NR4A1P22736 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR4A1P22736 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.58■□□□□ 0.72
NR4A1P22736 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
NR4A1P22736 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.57■□□□□ 0.72
NR4A1P22736 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 AL136116.3-201ENST00000402907 1138 ntBASIC19.57■□□□□ 0.72
NR4A1P22736 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.57■□□□□ 0.72
NR4A1P22736 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.57■□□□□ 0.72
NR4A1P22736 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
NR4A1P22736 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NR4A1P22736 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR4A1P22736 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.56■□□□□ 0.72
NR4A1P22736 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.56■□□□□ 0.72
NR4A1P22736 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
NR4A1P22736 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.56■□□□□ 0.72
NR4A1P22736 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.56■□□□□ 0.72
NR4A1P22736 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR4A1P22736 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
NR4A1P22736 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms