Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
BCKDHBP21953 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
BCKDHBP21953 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCKDHBP21953 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.16■□□□□ 0.98
BCKDHBP21953 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.16■□□□□ 0.98
BCKDHBP21953 GCSHP5-201ENST00000443090 522 ntBASIC21.16■□□□□ 0.98
BCKDHBP21953 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.16■□□□□ 0.98
BCKDHBP21953 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.16■□□□□ 0.98
BCKDHBP21953 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BCKDHBP21953 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BCKDHBP21953 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.16■□□□□ 0.98
BCKDHBP21953 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BCKDHBP21953 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BCKDHBP21953 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
BCKDHBP21953 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.15■□□□□ 0.98
BCKDHBP21953 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.15■□□□□ 0.98
BCKDHBP21953 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
BCKDHBP21953 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.15■□□□□ 0.98
BCKDHBP21953 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.15■□□□□ 0.98
BCKDHBP21953 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
BCKDHBP21953 AC091874.3-201ENST00000512672 1195 ntBASIC21.15■□□□□ 0.98
BCKDHBP21953 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.15■□□□□ 0.98
BCKDHBP21953 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.15■□□□□ 0.98
BCKDHBP21953 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BCKDHBP21953 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.15■□□□□ 0.98
BCKDHBP21953 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
BCKDHBP21953 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BCKDHBP21953 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BCKDHBP21953 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.14■□□□□ 0.98
BCKDHBP21953 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
BCKDHBP21953 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
BCKDHBP21953 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.14■□□□□ 0.97
BCKDHBP21953 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.14■□□□□ 0.97
BCKDHBP21953 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.14■□□□□ 0.97
BCKDHBP21953 AC008175.2-201ENST00000612840 297 ntBASIC21.14■□□□□ 0.97
BCKDHBP21953 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.14■□□□□ 0.97
BCKDHBP21953 AC120498.10-201ENST00000621827 505 ntBASIC21.14■□□□□ 0.97
BCKDHBP21953 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.14■□□□□ 0.97
BCKDHBP21953 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BCKDHBP21953 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BCKDHBP21953 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCKDHBP21953 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
BCKDHBP21953 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.13■□□□□ 0.97
BCKDHBP21953 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.13■□□□□ 0.97
BCKDHBP21953 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.13■□□□□ 0.97
BCKDHBP21953 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BCKDHBP21953 AC006058.3-201ENST00000606217 1069 ntBASIC21.13■□□□□ 0.97
BCKDHBP21953 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.13■□□□□ 0.97
BCKDHBP21953 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCKDHBP21953 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.13■□□□□ 0.97
BCKDHBP21953 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.13■□□□□ 0.97
BCKDHBP21953 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.13■□□□□ 0.97
BCKDHBP21953 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BCKDHBP21953 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 AC010980.2-201ENST00000587099 1412 ntBASIC21.12■□□□□ 0.97
BCKDHBP21953 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.12■□□□□ 0.97
BCKDHBP21953 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
BCKDHBP21953 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.12■□□□□ 0.97
BCKDHBP21953 AL158047.1-201ENST00000445918 881 ntBASIC21.12■□□□□ 0.97
BCKDHBP21953 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.12■□□□□ 0.97
BCKDHBP21953 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.12■□□□□ 0.97
BCKDHBP21953 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.12■□□□□ 0.97
BCKDHBP21953 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.12■□□□□ 0.97
BCKDHBP21953 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BCKDHBP21953 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.12■□□□□ 0.97
BCKDHBP21953 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
BCKDHBP21953 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
BCKDHBP21953 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.11■□□□□ 0.97
BCKDHBP21953 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.11■□□□□ 0.97
BCKDHBP21953 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
BCKDHBP21953 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms