Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKB1P19838 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NFKB1P19838 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NFKB1P19838 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.65■■□□□ 1.06
NFKB1P19838 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NFKB1P19838 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKB1P19838 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NFKB1P19838 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.64■■□□□ 1.06
NFKB1P19838 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.64■■□□□ 1.05
NFKB1P19838 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.64■■□□□ 1.05
NFKB1P19838 AC005224.4-201ENST00000583262 1652 ntBASIC21.64■■□□□ 1.05
NFKB1P19838 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NFKB1P19838 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.64■■□□□ 1.05
NFKB1P19838 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.64■■□□□ 1.05
NFKB1P19838 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NFKB1P19838 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.64■■□□□ 1.05
NFKB1P19838 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.64■■□□□ 1.05
NFKB1P19838 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NFKB1P19838 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NFKB1P19838 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NFKB1P19838 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NFKB1P19838 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NFKB1P19838 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 AL137060.1-201ENST00000618151 2648 ntBASIC21.63■■□□□ 1.05
NFKB1P19838 AC055733.4-201ENST00000638462 1354 ntBASIC21.63■■□□□ 1.05
NFKB1P19838 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NFKB1P19838 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.63■■□□□ 1.05
NFKB1P19838 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.63■■□□□ 1.05
NFKB1P19838 MIR6084-201ENST00000622012 110 ntBASIC21.63■■□□□ 1.05
NFKB1P19838 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.63■■□□□ 1.05
NFKB1P19838 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.63■■□□□ 1.05
NFKB1P19838 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NFKB1P19838 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NFKB1P19838 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.63■■□□□ 1.05
NFKB1P19838 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.63■■□□□ 1.05
NFKB1P19838 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NFKB1P19838 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NFKB1P19838 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NFKB1P19838 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NFKB1P19838 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.62■■□□□ 1.05
NFKB1P19838 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
NFKB1P19838 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.62■■□□□ 1.05
NFKB1P19838 AL354811.1-201ENST00000610286 706 ntBASIC21.62■■□□□ 1.05
NFKB1P19838 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NFKB1P19838 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NFKB1P19838 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
NFKB1P19838 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.61■■□□□ 1.05
NFKB1P19838 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
NFKB1P19838 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.61■■□□□ 1.05
NFKB1P19838 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.61■■□□□ 1.05
NFKB1P19838 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 IRS3P-201ENST00000223076 1006 ntBASIC21.61■■□□□ 1.05
NFKB1P19838 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.61■■□□□ 1.05
NFKB1P19838 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.61■■□□□ 1.05
NFKB1P19838 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.61■■□□□ 1.05
NFKB1P19838 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NFKB1P19838 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.61■■□□□ 1.05
NFKB1P19838 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NFKB1P19838 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.6■■□□□ 1.05
NFKB1P19838 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.6■■□□□ 1.05
NFKB1P19838 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NFKB1P19838 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NFKB1P19838 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.6■■□□□ 1.05
NFKB1P19838 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.6■■□□□ 1.05
NFKB1P19838 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.6■■□□□ 1.05
NFKB1P19838 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
NFKB1P19838 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKB1P19838 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKB1P19838 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NFKB1P19838 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NFKB1P19838 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NFKB1P19838 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.59■■□□□ 1.05
NFKB1P19838 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.59■■□□□ 1.05
NFKB1P19838 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.59■■□□□ 1.05
NFKB1P19838 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
NFKB1P19838 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
NFKB1P19838 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKB1P19838 AL358852.1-201ENST00000623174 1268 ntBASIC21.59■■□□□ 1.05
NFKB1P19838 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKB1P19838 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NFKB1P19838 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NFKB1P19838 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NFKB1P19838 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NFKB1P19838 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms