Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRAFP15056 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.79■■□□□ 1.08
BRAFP15056 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.79■■□□□ 1.08
BRAFP15056 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRAFP15056 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRAFP15056 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRAFP15056 MIR939-201ENST00000401314 82 ntBASIC21.78■■□□□ 1.08
BRAFP15056 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 AF213884.3-201ENST00000563833 479 ntBASIC21.78■■□□□ 1.08
BRAFP15056 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRAFP15056 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRAFP15056 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.78■■□□□ 1.08
BRAFP15056 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BRAFP15056 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRAFP15056 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.77■■□□□ 1.08
BRAFP15056 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRAFP15056 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
BRAFP15056 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BRAFP15056 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
BRAFP15056 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BRAFP15056 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BRAFP15056 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.77■■□□□ 1.08
BRAFP15056 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.77■■□□□ 1.08
BRAFP15056 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.77■■□□□ 1.08
BRAFP15056 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.77■■□□□ 1.08
BRAFP15056 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRAFP15056 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRAFP15056 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BRAFP15056 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
BRAFP15056 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.77■■□□□ 1.07
BRAFP15056 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BRAFP15056 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BRAFP15056 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
BRAFP15056 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.76■■□□□ 1.07
BRAFP15056 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.76■■□□□ 1.07
BRAFP15056 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.76■■□□□ 1.07
BRAFP15056 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.76■■□□□ 1.07
BRAFP15056 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.76■■□□□ 1.07
BRAFP15056 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.76■■□□□ 1.07
BRAFP15056 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRAFP15056 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BRAFP15056 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.75■■□□□ 1.07
BRAFP15056 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
BRAFP15056 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.75■■□□□ 1.07
BRAFP15056 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.75■■□□□ 1.07
BRAFP15056 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.75■■□□□ 1.07
BRAFP15056 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.75■■□□□ 1.07
BRAFP15056 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.75■■□□□ 1.07
BRAFP15056 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BRAFP15056 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
BRAFP15056 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.75■■□□□ 1.07
BRAFP15056 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
BRAFP15056 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRAFP15056 AC133637.1-201ENST00000624115 1537 ntBASIC21.75■■□□□ 1.07
BRAFP15056 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.74■■□□□ 1.07
BRAFP15056 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
BRAFP15056 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
BRAFP15056 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
BRAFP15056 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.74■■□□□ 1.07
BRAFP15056 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.74■■□□□ 1.07
BRAFP15056 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRAFP15056 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRAFP15056 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRAFP15056 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRAFP15056 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRAFP15056 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
BRAFP15056 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BRAFP15056 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms