Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PF4V1P10720 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PF4V1P10720 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PF4V1P10720 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.81■□□□□ 0.28
PF4V1P10720 TPRG1LP1-201ENST00000598702 760 ntBASIC16.81■□□□□ 0.28
PF4V1P10720 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.81■□□□□ 0.28
PF4V1P10720 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
PF4V1P10720 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PF4V1P10720 GUSBP5-202ENST00000510805 1989 ntBASIC16.8■□□□□ 0.28
PF4V1P10720 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.8■□□□□ 0.28
PF4V1P10720 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.8■□□□□ 0.28
PF4V1P10720 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.8■□□□□ 0.28
PF4V1P10720 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.8■□□□□ 0.28
PF4V1P10720 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.8■□□□□ 0.28
PF4V1P10720 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PF4V1P10720 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PF4V1P10720 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.8■□□□□ 0.28
PF4V1P10720 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.8■□□□□ 0.28
PF4V1P10720 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.8■□□□□ 0.28
PF4V1P10720 AC009237.3-201ENST00000393279 1427 ntBASIC16.79■□□□□ 0.28
PF4V1P10720 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PF4V1P10720 ID1-201ENST00000376105 1233 ntBASIC16.79■□□□□ 0.28
PF4V1P10720 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.79■□□□□ 0.28
PF4V1P10720 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.79■□□□□ 0.28
PF4V1P10720 KRT19P1-201ENST00000405746 1186 ntBASIC16.79■□□□□ 0.28
PF4V1P10720 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.79■□□□□ 0.28
PF4V1P10720 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PF4V1P10720 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.79■□□□□ 0.28
PF4V1P10720 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PF4V1P10720 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.79■□□□□ 0.28
PF4V1P10720 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
PF4V1P10720 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PF4V1P10720 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.78■□□□□ 0.28
PF4V1P10720 AC012676.1-201ENST00000574705 1949 ntBASIC16.78■□□□□ 0.28
PF4V1P10720 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PF4V1P10720 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PF4V1P10720 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.78■□□□□ 0.28
PF4V1P10720 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PF4V1P10720 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.78■□□□□ 0.28
PF4V1P10720 AC079140.4-201ENST00000507448 529 ntBASIC16.78■□□□□ 0.28
PF4V1P10720 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.78■□□□□ 0.28
PF4V1P10720 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PF4V1P10720 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PF4V1P10720 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PF4V1P10720 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PF4V1P10720 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PF4V1P10720 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PF4V1P10720 AC242852.2-201ENST00000615738 1807 ntBASIC16.77■□□□□ 0.28
PF4V1P10720 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.77■□□□□ 0.28
PF4V1P10720 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.77■□□□□ 0.28
PF4V1P10720 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.77■□□□□ 0.28
PF4V1P10720 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.77■□□□□ 0.28
PF4V1P10720 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.77■□□□□ 0.28
PF4V1P10720 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.77■□□□□ 0.28
PF4V1P10720 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.77■□□□□ 0.28
PF4V1P10720 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.77■□□□□ 0.28
PF4V1P10720 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.77■□□□□ 0.28
PF4V1P10720 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.77■□□□□ 0.28
PF4V1P10720 AC080038.1-201ENST00000611274 1154 ntBASIC16.77■□□□□ 0.28
PF4V1P10720 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.77■□□□□ 0.28
PF4V1P10720 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PF4V1P10720 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PF4V1P10720 AC004854.2-201ENST00000608450 1441 ntBASIC16.77■□□□□ 0.27
PF4V1P10720 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PF4V1P10720 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.77■□□□□ 0.27
PF4V1P10720 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PF4V1P10720 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.77■□□□□ 0.27
PF4V1P10720 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.77■□□□□ 0.27
PF4V1P10720 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PF4V1P10720 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms