Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM49CP0CI26 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 TPRG1LP1-201ENST00000598702 760 ntBASIC23.12■■□□□ 1.29
TRIM49CP0CI26 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49CP0CI26 AC026310.3-201ENST00000625186 2373 ntBASIC23.12■■□□□ 1.29
TRIM49CP0CI26 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 AC104564.3-201ENST00000582367 638 ntBASIC23.11■■□□□ 1.29
TRIM49CP0CI26 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49CP0CI26 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRIM49CP0CI26 Z98882.1-201ENST00000622160 2253 ntBASIC23.1■■□□□ 1.29
TRIM49CP0CI26 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM49CP0CI26 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 AL137060.1-201ENST00000618151 2648 ntBASIC23.08■■□□□ 1.29
TRIM49CP0CI26 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TRIM49CP0CI26 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.08■■□□□ 1.28
TRIM49CP0CI26 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM49CP0CI26 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.08■■□□□ 1.28
TRIM49CP0CI26 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
TRIM49CP0CI26 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.08■■□□□ 1.28
TRIM49CP0CI26 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TRIM49CP0CI26 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49CP0CI26 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49CP0CI26 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM49CP0CI26 AC027612.3-201ENST00000413684 1047 ntBASIC23.06■■□□□ 1.28
TRIM49CP0CI26 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49CP0CI26 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49CP0CI26 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49CP0CI26 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM49CP0CI26 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms