Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC083880.1-201ENST00000608266 535 ntBASIC24.21■■□□□ 1.47
HOXC6P09630 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HOXC6P09630 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HOXC6P09630 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.21■■□□□ 1.47
HOXC6P09630 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.2■■□□□ 1.47
HOXC6P09630 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
HOXC6P09630 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
HOXC6P09630 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
HOXC6P09630 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.2■■□□□ 1.46
HOXC6P09630 AL162412.1-201ENST00000567129 965 ntBASIC24.2■■□□□ 1.46
HOXC6P09630 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
HOXC6P09630 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.2■■□□□ 1.46
HOXC6P09630 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HOXC6P09630 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.2■■□□□ 1.46
HOXC6P09630 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
HOXC6P09630 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
HOXC6P09630 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.19■■□□□ 1.46
HOXC6P09630 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.19■■□□□ 1.46
HOXC6P09630 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.19■■□□□ 1.46
HOXC6P09630 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.19■■□□□ 1.46
HOXC6P09630 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.19■■□□□ 1.46
HOXC6P09630 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HOXC6P09630 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.19■■□□□ 1.46
HOXC6P09630 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
HOXC6P09630 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.18■■□□□ 1.46
HOXC6P09630 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
HOXC6P09630 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 BX276092.2-201ENST00000417668 665 ntBASIC24.18■■□□□ 1.46
HOXC6P09630 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.18■■□□□ 1.46
HOXC6P09630 AC008175.2-201ENST00000612840 297 ntBASIC24.18■■□□□ 1.46
HOXC6P09630 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HOXC6P09630 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
HOXC6P09630 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
HOXC6P09630 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.17■■□□□ 1.46
HOXC6P09630 POU5F1P4-201ENST00000413175 1085 ntBASIC24.17■■□□□ 1.46
HOXC6P09630 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.17■■□□□ 1.46
HOXC6P09630 RARRES2P4-201ENST00000514074 484 ntBASIC24.17■■□□□ 1.46
HOXC6P09630 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.17■■□□□ 1.46
HOXC6P09630 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
HOXC6P09630 AC120498.10-201ENST00000621827 505 ntBASIC24.17■■□□□ 1.46
HOXC6P09630 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HOXC6P09630 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
HOXC6P09630 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.16■■□□□ 1.46
HOXC6P09630 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.16■■□□□ 1.46
HOXC6P09630 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HOXC6P09630 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.15■■□□□ 1.46
HOXC6P09630 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.15■■□□□ 1.46
HOXC6P09630 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.15■■□□□ 1.46
HOXC6P09630 AC098590.1-201ENST00000468126 897 ntBASIC24.15■■□□□ 1.46
HOXC6P09630 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.15■■□□□ 1.46
HOXC6P09630 AC097658.1-201ENST00000475555 843 ntBASIC24.15■■□□□ 1.46
HOXC6P09630 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.15■■□□□ 1.46
HOXC6P09630 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.15■■□□□ 1.46
HOXC6P09630 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HOXC6P09630 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
HOXC6P09630 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
HOXC6P09630 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HOXC6P09630 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HOXC6P09630 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HOXC6P09630 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HOXC6P09630 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.14■■□□□ 1.45
HOXC6P09630 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.14■■□□□ 1.45
HOXC6P09630 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.14■■□□□ 1.45
HOXC6P09630 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.14■■□□□ 1.45
HOXC6P09630 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms