Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HLA-DQB2P05538 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.61■■□□□ 1.05
HLA-DQB2P05538 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 AC019069.1-201ENST00000610008 1333 ntBASIC21.6■■□□□ 1.05
HLA-DQB2P05538 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 YBX1P1-201ENST00000445822 960 ntBASIC21.6■■□□□ 1.05
HLA-DQB2P05538 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HLA-DQB2P05538 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 LINC02228-203ENST00000641970 1355 ntBASIC21.59■■□□□ 1.05
HLA-DQB2P05538 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQB2P05538 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 AC123595.1-201ENST00000440769 1046 ntBASIC21.58■■□□□ 1.05
HLA-DQB2P05538 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQB2P05538 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQB2P05538 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 AC007375.3-201ENST00000600936 2314 ntBASIC21.57■■□□□ 1.04
HLA-DQB2P05538 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQB2P05538 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms