Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DPB1P04440 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 SRD5A1P1-201ENST00000442297 786 ntBASIC19.03■□□□□ 0.64
HLA-DPB1P04440 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPB1P04440 AC004687.1-201ENST00000579003 1625 ntBASIC19.03■□□□□ 0.64
HLA-DPB1P04440 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 AC099791.2-201ENST00000605725 427 ntBASIC19.02■□□□□ 0.64
HLA-DPB1P04440 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.02■□□□□ 0.64
HLA-DPB1P04440 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DPB1P04440 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DPB1P04440 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.02■□□□□ 0.63
HLA-DPB1P04440 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DPB1P04440 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DPB1P04440 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPB1P04440 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPB1P04440 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HLA-DPB1P04440 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HLA-DPB1P04440 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HLA-DPB1P04440 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HLA-DPB1P04440 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 AL136116.3-201ENST00000402907 1138 ntBASIC19■□□□□ 0.63
HLA-DPB1P04440 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DPB1P04440 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms