Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PDGFAP04085 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.84■□□□□ 0.77
PDGFAP04085 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDGFAP04085 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.84■□□□□ 0.77
PDGFAP04085 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFAP04085 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFAP04085 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFAP04085 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFAP04085 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDGFAP04085 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFAP04085 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDGFAP04085 SLC29A4P1-201ENST00000398760 971 ntBASIC19.83■□□□□ 0.77
PDGFAP04085 CNN2P6-201ENST00000439038 900 ntBASIC19.83■□□□□ 0.77
PDGFAP04085 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFAP04085 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDGFAP04085 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFAP04085 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
PDGFAP04085 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFAP04085 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.83■□□□□ 0.76
PDGFAP04085 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFAP04085 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFAP04085 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFAP04085 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PDGFAP04085 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PDGFAP04085 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDGFAP04085 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFAP04085 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFAP04085 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFAP04085 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDGFAP04085 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.82■□□□□ 0.76
PDGFAP04085 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFAP04085 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFAP04085 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFAP04085 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFAP04085 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFAP04085 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFAP04085 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDGFAP04085 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFAP04085 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFAP04085 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDGFAP04085 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFAP04085 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFAP04085 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFAP04085 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFAP04085 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFAP04085 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFAP04085 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFAP04085 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
PDGFAP04085 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFAP04085 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFAP04085 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
PDGFAP04085 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDGFAP04085 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDGFAP04085 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDGFAP04085 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PDGFAP04085 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.79■□□□□ 0.76
PDGFAP04085 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.79■□□□□ 0.76
PDGFAP04085 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 AC055733.4-201ENST00000638462 1354 ntBASIC19.79■□□□□ 0.76
PDGFAP04085 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFAP04085 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDGFAP04085 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDGFAP04085 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFAP04085 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFAP04085 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.78■□□□□ 0.76
PDGFAP04085 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFAP04085 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDGFAP04085 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFAP04085 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFAP04085 AF201337.1-201ENST00000520239 748 ntBASIC19.78■□□□□ 0.76
PDGFAP04085 AC105036.2-201ENST00000569468 176 ntBASIC19.78■□□□□ 0.76
PDGFAP04085 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PDGFAP04085 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.78■□□□□ 0.76
PDGFAP04085 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms