Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.99■□□□□ 0.79
MT-ND1P03886 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.99■□□□□ 0.79
MT-ND1P03886 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 UNC93B8-201ENST00000511903 705 ntBASIC19.99■□□□□ 0.79
MT-ND1P03886 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND1P03886 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.99■□□□□ 0.79
MT-ND1P03886 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-ND1P03886 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.98■□□□□ 0.79
MT-ND1P03886 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
MT-ND1P03886 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-ND1P03886 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MT-ND1P03886 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-ND1P03886 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND1P03886 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MT-ND1P03886 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND1P03886 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND1P03886 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.97■□□□□ 0.79
MT-ND1P03886 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
MT-ND1P03886 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND1P03886 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-ND1P03886 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.97■□□□□ 0.79
MT-ND1P03886 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND1P03886 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MT-ND1P03886 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.96■□□□□ 0.79
MT-ND1P03886 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND1P03886 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND1P03886 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND1P03886 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.96■□□□□ 0.79
MT-ND1P03886 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND1P03886 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND1P03886 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND1P03886 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND1P03886 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
MT-ND1P03886 PCDHAC2-203ENST00000615316 3011 ntBASIC19.96■□□□□ 0.79
MT-ND1P03886 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MT-ND1P03886 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.96■□□□□ 0.79
MT-ND1P03886 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-ND1P03886 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND1P03886 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.95■□□□□ 0.79
MT-ND1P03886 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 FEM1AP1-201ENST00000431297 1995 ntBASIC19.95■□□□□ 0.78
MT-ND1P03886 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.95■□□□□ 0.78
MT-ND1P03886 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MT-ND1P03886 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.95■□□□□ 0.78
MT-ND1P03886 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.95■□□□□ 0.78
MT-ND1P03886 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.95■□□□□ 0.78
MT-ND1P03886 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.95■□□□□ 0.78
MT-ND1P03886 AL391422.3-201ENST00000603791 2761 ntBASIC19.95■□□□□ 0.78
MT-ND1P03886 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MT-ND1P03886 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND1P03886 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND1P03886 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND1P03886 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND1P03886 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND1P03886 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
MT-ND1P03886 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND1P03886 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MT-ND1P03886 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND1P03886 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.94■□□□□ 0.78
MT-ND1P03886 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MT-ND1P03886 AL117332.1-201ENST00000622628 974 ntBASIC19.94■□□□□ 0.78
MT-ND1P03886 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND1P03886 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND1P03886 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND1P03886 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND1P03886 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.94■□□□□ 0.78
MT-ND1P03886 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
MT-ND1P03886 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 AC104564.3-201ENST00000582367 638 ntBASIC19.93■□□□□ 0.78
MT-ND1P03886 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms