Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6AP02538 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6AP02538 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT6AP02538 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT6AP02538 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6AP02538 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KRT6AP02538 AC024257.2-201ENST00000549699 147 ntBASIC20.57■□□□□ 0.88
KRT6AP02538 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT6AP02538 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6AP02538 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6AP02538 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 AC135279.3-201ENST00000610945 1311 ntBASIC20.56■□□□□ 0.88
KRT6AP02538 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KRT6AP02538 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.56■□□□□ 0.88
KRT6AP02538 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT6AP02538 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6AP02538 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT6AP02538 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6AP02538 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6AP02538 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT6AP02538 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 AC126544.1-201ENST00000580842 1059 ntBASIC20.55■□□□□ 0.88
KRT6AP02538 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 AC008406.3-201ENST00000620001 1374 ntBASIC20.55■□□□□ 0.88
KRT6AP02538 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT6AP02538 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KRT6AP02538 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6AP02538 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT6AP02538 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT6AP02538 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT6AP02538 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT6AP02538 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6AP02538 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6AP02538 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6AP02538 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6AP02538 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT6AP02538 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRT6AP02538 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT6AP02538 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT6AP02538 AC133561.4-201ENST00000566112 224 ntBASIC20.53■□□□□ 0.88
KRT6AP02538 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 AC005229.4-201ENST00000610085 2198 ntBASIC20.53■□□□□ 0.88
KRT6AP02538 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KRT6AP02538 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6AP02538 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6AP02538 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6AP02538 FEM1AP4-201ENST00000443167 1987 ntBASIC20.52■□□□□ 0.88
KRT6AP02538 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6AP02538 AC003102.1-202ENST00000563394 1796 ntBASIC20.52■□□□□ 0.88
KRT6AP02538 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT6AP02538 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.52■□□□□ 0.88
KRT6AP02538 SMUG1P1-201ENST00000590640 811 ntBASIC20.52■□□□□ 0.88
KRT6AP02538 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6AP02538 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6AP02538 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRT6AP02538 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
KRT6AP02538 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KRT6AP02538 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT6AP02538 SLC25A24-204ENST00000569674 2357 ntBASIC20.51■□□□□ 0.87
KRT6AP02538 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.51■□□□□ 0.87
KRT6AP02538 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT6AP02538 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
KRT6AP02538 IGHV3-19-201ENST00000521488 291 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms