Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQA1P01909 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
HLA-DQA1P01909 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
HLA-DQA1P01909 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQA1P01909 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
HLA-DQA1P01909 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 AL592293.1-201ENST00000502889 1188 ntBASIC15.95■□□□□ 0.14
HLA-DQA1P01909 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA1P01909 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA1P01909 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 AP005212.1-201ENST00000581547 1997 ntBASIC15.93■□□□□ 0.14
HLA-DQA1P01909 AFG3L1P-217ENST00000557444 2447 ntBASIC15.93■□□□□ 0.14
HLA-DQA1P01909 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DQA1P01909 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms