Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFBP01127 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.66■■□□□ 1.06
PDGFBP01127 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PDGFBP01127 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDGFBP01127 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFBP01127 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFBP01127 CYP2T3P-201ENST00000601990 817 ntBASIC21.66■■□□□ 1.06
PDGFBP01127 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.66■■□□□ 1.06
PDGFBP01127 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFBP01127 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFBP01127 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.65■■□□□ 1.06
PDGFBP01127 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDGFBP01127 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.65■■□□□ 1.06
PDGFBP01127 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.65■■□□□ 1.06
PDGFBP01127 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFBP01127 AC138932.3-201ENST00000567634 1902 ntBASIC21.65■■□□□ 1.06
PDGFBP01127 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.64■■□□□ 1.06
PDGFBP01127 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDGFBP01127 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDGFBP01127 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDGFBP01127 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.64■■□□□ 1.05
PDGFBP01127 LSM12P1-201ENST00000411836 588 ntBASIC21.64■■□□□ 1.05
PDGFBP01127 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.64■■□□□ 1.05
PDGFBP01127 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.64■■□□□ 1.05
PDGFBP01127 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.64■■□□□ 1.05
PDGFBP01127 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDGFBP01127 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDGFBP01127 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.64■■□□□ 1.05
PDGFBP01127 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDGFBP01127 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFBP01127 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFBP01127 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFBP01127 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.63■■□□□ 1.05
PDGFBP01127 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.63■■□□□ 1.05
PDGFBP01127 AC233263.1-201ENST00000578059 224 ntBASIC21.63■■□□□ 1.05
PDGFBP01127 AL591742.1-201ENST00000604433 565 ntBASIC21.63■■□□□ 1.05
PDGFBP01127 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFBP01127 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFBP01127 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDGFBP01127 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PDGFBP01127 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.62■■□□□ 1.05
PDGFBP01127 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.62■■□□□ 1.05
PDGFBP01127 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 BX088651.1-201ENST00000540551 451 ntBASIC21.62■■□□□ 1.05
PDGFBP01127 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.62■■□□□ 1.05
PDGFBP01127 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PDGFBP01127 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.62■■□□□ 1.05
PDGFBP01127 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.62■■□□□ 1.05
PDGFBP01127 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.62■■□□□ 1.05
PDGFBP01127 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFBP01127 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 KRT17P1-201ENST00000399211 1546 ntBASIC21.61■■□□□ 1.05
PDGFBP01127 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.61■■□□□ 1.05
PDGFBP01127 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.61■■□□□ 1.05
PDGFBP01127 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PDGFBP01127 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFBP01127 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.61■■□□□ 1.05
PDGFBP01127 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PDGFBP01127 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.61■■□□□ 1.05
PDGFBP01127 AC079089.2-201ENST00000531211 1277 ntBASIC21.61■■□□□ 1.05
PDGFBP01127 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PDGFBP01127 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.61■■□□□ 1.05
PDGFBP01127 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.61■■□□□ 1.05
PDGFBP01127 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.61■■□□□ 1.05
PDGFBP01127 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.6■■□□□ 1.05
PDGFBP01127 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
PDGFBP01127 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDGFBP01127 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.6■■□□□ 1.05
PDGFBP01127 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFBP01127 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PDGFBP01127 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms