Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.33■□□□□ 0.36
SCAF4O95104 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAF4O95104 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAF4O95104 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.32■□□□□ 0.36
SCAF4O95104 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.32■□□□□ 0.36
SCAF4O95104 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAF4O95104 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAF4O95104 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SCAF4O95104 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SCAF4O95104 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAF4O95104 AC010997.5-201ENST00000609182 354 ntBASIC17.32■□□□□ 0.36
SCAF4O95104 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
SCAF4O95104 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SCAF4O95104 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAF4O95104 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAF4O95104 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SCAF4O95104 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.31■□□□□ 0.36
SCAF4O95104 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAF4O95104 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SCAF4O95104 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SCAF4O95104 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SCAF4O95104 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SCAF4O95104 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 AC005703.6-201ENST00000623265 1329 ntBASIC17.31■□□□□ 0.36
SCAF4O95104 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SCAF4O95104 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 AL356441.2-201ENST00000443009 864 ntBASIC17.31■□□□□ 0.36
SCAF4O95104 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAF4O95104 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SCAF4O95104 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAF4O95104 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCAF4O95104 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SCAF4O95104 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SCAF4O95104 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SCAF4O95104 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SCAF4O95104 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCAF4O95104 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.3■□□□□ 0.36
SCAF4O95104 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SCAF4O95104 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SCAF4O95104 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.3■□□□□ 0.36
SCAF4O95104 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.3■□□□□ 0.36
SCAF4O95104 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAF4O95104 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCAF4O95104 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SCAF4O95104 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.29■□□□□ 0.36
SCAF4O95104 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SCAF4O95104 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAF4O95104 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAF4O95104 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAF4O95104 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.29■□□□□ 0.36
SCAF4O95104 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAF4O95104 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAF4O95104 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAF4O95104 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAF4O95104 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCAF4O95104 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SCAF4O95104 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAF4O95104 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAF4O95104 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
SCAF4O95104 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAF4O95104 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.28■□□□□ 0.36
SCAF4O95104 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAF4O95104 Z98882.1-201ENST00000622160 2253 ntBASIC17.28■□□□□ 0.36
SCAF4O95104 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SCAF4O95104 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SCAF4O95104 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms