Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BEST1O76090 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BEST1O76090 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BEST1O76090 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BEST1O76090 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.44■■□□□ 1.18
BEST1O76090 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.44■■□□□ 1.18
BEST1O76090 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.44■■□□□ 1.18
BEST1O76090 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.44■■□□□ 1.18
BEST1O76090 EEF1DP3-203ENST00000566025 782 ntBASIC22.44■■□□□ 1.18
BEST1O76090 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BEST1O76090 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.44■■□□□ 1.18
BEST1O76090 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
BEST1O76090 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.43■■□□□ 1.18
BEST1O76090 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BEST1O76090 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
BEST1O76090 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
BEST1O76090 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
BEST1O76090 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BEST1O76090 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BEST1O76090 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.42■■□□□ 1.18
BEST1O76090 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
BEST1O76090 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.42■■□□□ 1.18
BEST1O76090 AC137761.2-201ENST00000561729 223 ntBASIC22.42■■□□□ 1.18
BEST1O76090 AC145350.3-201ENST00000569033 163 ntBASIC22.42■■□□□ 1.18
BEST1O76090 AL137784.2-201ENST00000607332 1000 ntBASIC22.42■■□□□ 1.18
BEST1O76090 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BEST1O76090 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
BEST1O76090 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
BEST1O76090 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
BEST1O76090 C11orf96-202ENST00000528572 1834 ntBASIC22.41■■□□□ 1.18
BEST1O76090 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
BEST1O76090 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 AC004911.1-201ENST00000416316 871 ntBASIC22.41■■□□□ 1.18
BEST1O76090 AC006015.1-201ENST00000429970 570 ntBASIC22.41■■□□□ 1.18
BEST1O76090 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.41■■□□□ 1.18
BEST1O76090 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.41■■□□□ 1.18
BEST1O76090 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.41■■□□□ 1.18
BEST1O76090 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
BEST1O76090 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.41■■□□□ 1.18
BEST1O76090 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
BEST1O76090 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.4■■□□□ 1.18
BEST1O76090 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.4■■□□□ 1.18
BEST1O76090 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
BEST1O76090 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.4■■□□□ 1.18
BEST1O76090 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.4■■□□□ 1.18
BEST1O76090 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.4■■□□□ 1.18
BEST1O76090 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.4■■□□□ 1.18
BEST1O76090 AP001160.3-201ENST00000601484 763 ntBASIC22.4■■□□□ 1.18
BEST1O76090 AC053503.5-201ENST00000601508 636 ntBASIC22.4■■□□□ 1.18
BEST1O76090 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.4■■□□□ 1.18
BEST1O76090 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BEST1O76090 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.39■■□□□ 1.18
BEST1O76090 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
BEST1O76090 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
BEST1O76090 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
BEST1O76090 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.39■■□□□ 1.17
BEST1O76090 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
BEST1O76090 AC138907.5-202ENST00000569484 235 ntBASIC22.39■■□□□ 1.17
BEST1O76090 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
BEST1O76090 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.39■■□□□ 1.17
BEST1O76090 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.39■■□□□ 1.17
BEST1O76090 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
BEST1O76090 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
BEST1O76090 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BEST1O76090 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.38■■□□□ 1.17
BEST1O76090 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BEST1O76090 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
BEST1O76090 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
BEST1O76090 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.38■■□□□ 1.17
BEST1O76090 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BEST1O76090 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
BEST1O76090 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BEST1O76090 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.37■■□□□ 1.17
BEST1O76090 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BEST1O76090 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BEST1O76090 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.37■■□□□ 1.17
BEST1O76090 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BEST1O76090 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BEST1O76090 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms