Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.05■□□□□ 0.64
UPK3AO75631 MIR6084-201ENST00000622012 110 ntBASIC19.05■□□□□ 0.64
UPK3AO75631 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK3AO75631 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.05■□□□□ 0.64
UPK3AO75631 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
UPK3AO75631 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK3AO75631 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
UPK3AO75631 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.04■□□□□ 0.64
UPK3AO75631 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.04■□□□□ 0.64
UPK3AO75631 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
UPK3AO75631 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UPK3AO75631 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.04■□□□□ 0.64
UPK3AO75631 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
UPK3AO75631 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK3AO75631 AL358852.1-201ENST00000623174 1268 ntBASIC19.04■□□□□ 0.64
UPK3AO75631 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 AP004607.7-201ENST00000527152 1677 ntBASIC19.04■□□□□ 0.64
UPK3AO75631 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK3AO75631 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK3AO75631 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UPK3AO75631 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.03■□□□□ 0.64
UPK3AO75631 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.03■□□□□ 0.64
UPK3AO75631 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.03■□□□□ 0.64
UPK3AO75631 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK3AO75631 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.03■□□□□ 0.64
UPK3AO75631 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.03■□□□□ 0.64
UPK3AO75631 AL354811.1-201ENST00000610286 706 ntBASIC19.03■□□□□ 0.64
UPK3AO75631 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK3AO75631 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.02■□□□□ 0.64
UPK3AO75631 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK3AO75631 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.02■□□□□ 0.64
UPK3AO75631 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK3AO75631 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.02■□□□□ 0.64
UPK3AO75631 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK3AO75631 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK3AO75631 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UPK3AO75631 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.02■□□□□ 0.64
UPK3AO75631 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.02■□□□□ 0.64
UPK3AO75631 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.02■□□□□ 0.64
UPK3AO75631 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPK3AO75631 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK3AO75631 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK3AO75631 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK3AO75631 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPK3AO75631 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK3AO75631 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK3AO75631 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.01■□□□□ 0.63
UPK3AO75631 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK3AO75631 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UPK3AO75631 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.01■□□□□ 0.63
UPK3AO75631 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPK3AO75631 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.01■□□□□ 0.63
UPK3AO75631 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK3AO75631 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19■□□□□ 0.63
UPK3AO75631 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 BX005040.4-201ENST00000637145 1518 ntBASIC19■□□□□ 0.63
UPK3AO75631 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19■□□□□ 0.63
UPK3AO75631 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UPK3AO75631 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UPK3AO75631 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UPK3AO75631 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19■□□□□ 0.63
UPK3AO75631 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19■□□□□ 0.63
UPK3AO75631 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 Z98882.1-201ENST00000622160 2253 ntBASIC19■□□□□ 0.63
UPK3AO75631 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK3AO75631 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19■□□□□ 0.63
UPK3AO75631 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19■□□□□ 0.63
UPK3AO75631 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UPK3AO75631 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.99■□□□□ 0.63
UPK3AO75631 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms