Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
GFRA3O60609 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.99■□□□□ 0.95
GFRA3O60609 DUSP8P5-201ENST00000422884 1815 ntBASIC20.99■□□□□ 0.95
GFRA3O60609 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GFRA3O60609 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.98■□□□□ 0.95
GFRA3O60609 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.98■□□□□ 0.95
GFRA3O60609 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GFRA3O60609 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
GFRA3O60609 AC092368.3-202ENST00000574180 1591 ntBASIC20.97■□□□□ 0.95
GFRA3O60609 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA3O60609 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GFRA3O60609 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA3O60609 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA3O60609 AC092803.2-201ENST00000564287 1899 ntBASIC20.97■□□□□ 0.95
GFRA3O60609 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
GFRA3O60609 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA3O60609 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.97■□□□□ 0.95
GFRA3O60609 AC120498.10-201ENST00000621827 505 ntBASIC20.97■□□□□ 0.95
GFRA3O60609 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GFRA3O60609 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.97■□□□□ 0.95
GFRA3O60609 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.96■□□□□ 0.95
GFRA3O60609 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GFRA3O60609 AL135905.2-201ENST00000584934 1404 ntBASIC20.96■□□□□ 0.95
GFRA3O60609 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA3O60609 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GFRA3O60609 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA3O60609 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA3O60609 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA3O60609 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GFRA3O60609 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.96■□□□□ 0.95
GFRA3O60609 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.96■□□□□ 0.95
GFRA3O60609 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.96■□□□□ 0.95
GFRA3O60609 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GFRA3O60609 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GFRA3O60609 KRT17P1-201ENST00000399211 1546 ntBASIC20.95■□□□□ 0.94
GFRA3O60609 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GFRA3O60609 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GFRA3O60609 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GFRA3O60609 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.95■□□□□ 0.94
GFRA3O60609 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.95■□□□□ 0.94
GFRA3O60609 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GFRA3O60609 SOX15-203ENST00000570788 1093 ntBASIC20.95■□□□□ 0.94
GFRA3O60609 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.95■□□□□ 0.94
GFRA3O60609 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.95■□□□□ 0.94
GFRA3O60609 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.95■□□□□ 0.94
GFRA3O60609 AL121894.2-201ENST00000602977 491 ntBASIC20.95■□□□□ 0.94
GFRA3O60609 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
GFRA3O60609 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.95■□□□□ 0.94
GFRA3O60609 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GFRA3O60609 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA3O60609 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA3O60609 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA3O60609 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA3O60609 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.94■□□□□ 0.94
GFRA3O60609 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.94■□□□□ 0.94
GFRA3O60609 AL353708.3-201ENST00000610272 989 ntBASIC20.94■□□□□ 0.94
GFRA3O60609 AC113410.3-201ENST00000623366 203 ntBASIC20.94■□□□□ 0.94
GFRA3O60609 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA3O60609 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GFRA3O60609 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
GFRA3O60609 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.94■□□□□ 0.94
GFRA3O60609 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
GFRA3O60609 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
GFRA3O60609 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
GFRA3O60609 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
GFRA3O60609 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
GFRA3O60609 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GFRA3O60609 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
GFRA3O60609 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
GFRA3O60609 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.92■□□□□ 0.94
GFRA3O60609 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.92■□□□□ 0.94
GFRA3O60609 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.92■□□□□ 0.94
GFRA3O60609 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.92■□□□□ 0.94
GFRA3O60609 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GFRA3O60609 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 AC005363.2-201ENST00000618631 242 ntBASIC20.92■□□□□ 0.94
GFRA3O60609 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms