Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF9O60383 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GDF9O60383 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.9■□□□□ 0.94
GDF9O60383 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.9■□□□□ 0.94
GDF9O60383 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF9O60383 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.9■□□□□ 0.94
GDF9O60383 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
GDF9O60383 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF9O60383 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDF9O60383 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GDF9O60383 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.89■□□□□ 0.94
GDF9O60383 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDF9O60383 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.89■□□□□ 0.93
GDF9O60383 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDF9O60383 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.89■□□□□ 0.93
GDF9O60383 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.89■□□□□ 0.93
GDF9O60383 SNORA78-201ENST00000459373 127 ntBASIC20.89■□□□□ 0.93
GDF9O60383 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.89■□□□□ 0.93
GDF9O60383 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDF9O60383 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.89■□□□□ 0.93
GDF9O60383 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.89■□□□□ 0.93
GDF9O60383 Z99916.2-201ENST00000604037 246 ntBASIC20.89■□□□□ 0.93
GDF9O60383 FAM197Y4-202ENST00000622692 608 ntBASIC20.89■□□□□ 0.93
GDF9O60383 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF9O60383 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDF9O60383 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GDF9O60383 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
GDF9O60383 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.88■□□□□ 0.93
GDF9O60383 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
GDF9O60383 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GDF9O60383 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GDF9O60383 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GDF9O60383 LINC01023-201ENST00000606054 436 ntBASIC20.88■□□□□ 0.93
GDF9O60383 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF9O60383 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GDF9O60383 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GDF9O60383 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.87■□□□□ 0.93
GDF9O60383 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.87■□□□□ 0.93
GDF9O60383 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 RPPH1-201ENST00000516869 333 ntBASIC20.87■□□□□ 0.93
GDF9O60383 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF9O60383 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
GDF9O60383 AC008403.3-201ENST00000598924 454 ntBASIC20.87■□□□□ 0.93
GDF9O60383 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GDF9O60383 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF9O60383 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.86■□□□□ 0.93
GDF9O60383 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GDF9O60383 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GDF9O60383 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
GDF9O60383 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.86■□□□□ 0.93
GDF9O60383 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GDF9O60383 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.86■□□□□ 0.93
GDF9O60383 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.86■□□□□ 0.93
GDF9O60383 C1QBPP2-201ENST00000528754 825 ntBASIC20.86■□□□□ 0.93
GDF9O60383 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF9O60383 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GDF9O60383 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
GDF9O60383 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF9O60383 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF9O60383 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
GDF9O60383 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF9O60383 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF9O60383 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF9O60383 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF9O60383 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.85■□□□□ 0.93
GDF9O60383 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
GDF9O60383 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
GDF9O60383 EEF1DP3-203ENST00000566025 782 ntBASIC20.85■□□□□ 0.93
GDF9O60383 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.85■□□□□ 0.93
GDF9O60383 AP004607.7-201ENST00000527152 1677 ntBASIC20.85■□□□□ 0.93
GDF9O60383 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.85■□□□□ 0.93
GDF9O60383 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF9O60383 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF9O60383 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms