Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRICKLE3O43900 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.49■□□□□ 0.87
PRICKLE3O43900 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRICKLE3O43900 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRICKLE3O43900 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 AC053503.5-201ENST00000601508 636 ntBASIC20.48■□□□□ 0.87
PRICKLE3O43900 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRICKLE3O43900 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.48■□□□□ 0.87
PRICKLE3O43900 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.47■□□□□ 0.87
PRICKLE3O43900 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.47■□□□□ 0.87
PRICKLE3O43900 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.47■□□□□ 0.87
PRICKLE3O43900 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.47■□□□□ 0.87
PRICKLE3O43900 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRICKLE3O43900 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
PRICKLE3O43900 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.46■□□□□ 0.87
PRICKLE3O43900 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRICKLE3O43900 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRICKLE3O43900 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRICKLE3O43900 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRICKLE3O43900 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRICKLE3O43900 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRICKLE3O43900 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PRICKLE3O43900 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRICKLE3O43900 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRICKLE3O43900 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRICKLE3O43900 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.45■□□□□ 0.86
PRICKLE3O43900 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.45■□□□□ 0.86
PRICKLE3O43900 AC104187.1-201ENST00000607510 612 ntBASIC20.45■□□□□ 0.86
PRICKLE3O43900 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRICKLE3O43900 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PRICKLE3O43900 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRICKLE3O43900 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRICKLE3O43900 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRICKLE3O43900 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRICKLE3O43900 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.44■□□□□ 0.86
PRICKLE3O43900 AC138907.5-202ENST00000569484 235 ntBASIC20.44■□□□□ 0.86
PRICKLE3O43900 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRICKLE3O43900 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRICKLE3O43900 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRICKLE3O43900 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRICKLE3O43900 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRICKLE3O43900 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 KRT19P1-201ENST00000405746 1186 ntBASIC20.43■□□□□ 0.86
PRICKLE3O43900 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms