Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSPAN6O43657 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.29■■□□□ 1
TSPAN6O43657 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TSPAN6O43657 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 CDCA4P2-201ENST00000441182 718 ntBASIC21.28■■□□□ 1
TSPAN6O43657 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.28■■□□□ 1
TSPAN6O43657 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.28■■□□□ 1
TSPAN6O43657 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN6O43657 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.27■■□□□ 1
TSPAN6O43657 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.27■■□□□ 1
TSPAN6O43657 RAP2CP1-201ENST00000605103 478 ntBASIC21.27■■□□□ 1
TSPAN6O43657 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.27■■□□□ 1
TSPAN6O43657 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TSPAN6O43657 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.27■■□□□ 1
TSPAN6O43657 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.27■■□□□ 1
TSPAN6O43657 AC242852.2-201ENST00000615738 1807 ntBASIC21.27■□□□□ 0.99
TSPAN6O43657 AC092053.2-201ENST00000640557 1818 ntBASIC21.27■□□□□ 0.99
TSPAN6O43657 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TSPAN6O43657 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.26■□□□□ 0.99
TSPAN6O43657 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.26■□□□□ 0.99
TSPAN6O43657 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 AC026185.1-201ENST00000445748 174 ntBASIC21.26■□□□□ 0.99
TSPAN6O43657 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.26■□□□□ 0.99
TSPAN6O43657 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TSPAN6O43657 UBE2DNL-204ENST00000602536 740 ntBASIC21.26■□□□□ 0.99
TSPAN6O43657 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.26■□□□□ 0.99
TSPAN6O43657 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
TSPAN6O43657 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN6O43657 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSPAN6O43657 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.25■□□□□ 0.99
TSPAN6O43657 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.25■□□□□ 0.99
TSPAN6O43657 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.25■□□□□ 0.99
TSPAN6O43657 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.25■□□□□ 0.99
TSPAN6O43657 MFSD11-216ENST00000590393 1141 ntBASIC21.25■□□□□ 0.99
TSPAN6O43657 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN6O43657 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
TSPAN6O43657 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.25■□□□□ 0.99
TSPAN6O43657 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN6O43657 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.24■□□□□ 0.99
TSPAN6O43657 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
TSPAN6O43657 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TSPAN6O43657 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TSPAN6O43657 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.24■□□□□ 0.99
TSPAN6O43657 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.24■□□□□ 0.99
TSPAN6O43657 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.24■□□□□ 0.99
TSPAN6O43657 MYCNOS-205ENST00000641950 531 ntBASIC21.24■□□□□ 0.99
TSPAN6O43657 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.24■□□□□ 0.99
TSPAN6O43657 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
TSPAN6O43657 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.24■□□□□ 0.99
TSPAN6O43657 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.24■□□□□ 0.99
TSPAN6O43657 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN6O43657 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 AL117328.2-201ENST00000624617 1940 ntBASIC21.23■□□□□ 0.99
TSPAN6O43657 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.23■□□□□ 0.99
TSPAN6O43657 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TSPAN6O43657 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.23■□□□□ 0.99
TSPAN6O43657 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.23■□□□□ 0.99
TSPAN6O43657 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.23■□□□□ 0.99
TSPAN6O43657 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN6O43657 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
TSPAN6O43657 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms