Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 AC105233.4-201ENST00000642045 216 ntBASIC18.69■□□□□ 0.58
RER1O15258 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RER1O15258 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RER1O15258 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RER1O15258 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.69■□□□□ 0.58
RER1O15258 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RER1O15258 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RER1O15258 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RER1O15258 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.68■□□□□ 0.58
RER1O15258 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RER1O15258 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RER1O15258 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.68■□□□□ 0.58
RER1O15258 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.68■□□□□ 0.58
RER1O15258 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.68■□□□□ 0.58
RER1O15258 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RER1O15258 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RER1O15258 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RER1O15258 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.67■□□□□ 0.58
RER1O15258 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.67■□□□□ 0.58
RER1O15258 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
RER1O15258 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.67■□□□□ 0.58
RER1O15258 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.67■□□□□ 0.58
RER1O15258 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RER1O15258 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RER1O15258 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RER1O15258 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RER1O15258 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RER1O15258 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.66■□□□□ 0.58
RER1O15258 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.66■□□□□ 0.58
RER1O15258 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.66■□□□□ 0.58
RER1O15258 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.66■□□□□ 0.58
RER1O15258 MIR572-201ENST00000384983 95 ntBASIC18.66■□□□□ 0.58
RER1O15258 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.66■□□□□ 0.58
RER1O15258 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.66■□□□□ 0.58
RER1O15258 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.66■□□□□ 0.58
RER1O15258 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.66■□□□□ 0.58
RER1O15258 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.66■□□□□ 0.58
RER1O15258 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RER1O15258 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RER1O15258 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.66■□□□□ 0.58
RER1O15258 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
RER1O15258 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 AC005229.4-201ENST00000610085 2198 ntBASIC18.65■□□□□ 0.58
RER1O15258 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.65■□□□□ 0.58
RER1O15258 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.65■□□□□ 0.58
RER1O15258 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RER1O15258 AC142381.2-201ENST00000566120 298 ntBASIC18.65■□□□□ 0.58
RER1O15258 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.65■□□□□ 0.58
RER1O15258 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RER1O15258 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
RER1O15258 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RER1O15258 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RER1O15258 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RER1O15258 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RER1O15258 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.64■□□□□ 0.57
RER1O15258 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RER1O15258 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.64■□□□□ 0.57
RER1O15258 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RER1O15258 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RER1O15258 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.63■□□□□ 0.57
RER1O15258 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RER1O15258 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.63■□□□□ 0.57
RER1O15258 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RER1O15258 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RER1O15258 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.63■□□□□ 0.57
RER1O15258 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RER1O15258 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.63■□□□□ 0.57
RER1O15258 AC005837.3-201ENST00000612163 286 ntBASIC18.63■□□□□ 0.57
RER1O15258 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RER1O15258 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RER1O15258 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RER1O15258 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RER1O15258 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.63■□□□□ 0.57
RER1O15258 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RER1O15258 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RER1O15258 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.62■□□□□ 0.57
RER1O15258 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.62■□□□□ 0.57
RER1O15258 AF106564.1-201ENST00000607058 2553 ntBASIC18.62■□□□□ 0.57
RER1O15258 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RER1O15258 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RER1O15258 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.62■□□□□ 0.57
RER1O15258 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms