Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.66■□□□□ 0.9
UBFD1O14562 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.66■□□□□ 0.9
UBFD1O14562 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
UBFD1O14562 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
UBFD1O14562 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBFD1O14562 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBFD1O14562 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBFD1O14562 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBFD1O14562 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBFD1O14562 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
UBFD1O14562 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.65■□□□□ 0.9
UBFD1O14562 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
UBFD1O14562 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.65■□□□□ 0.9
UBFD1O14562 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.65■□□□□ 0.9
UBFD1O14562 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.65■□□□□ 0.9
UBFD1O14562 SLC25A24-204ENST00000569674 2357 ntBASIC20.65■□□□□ 0.9
UBFD1O14562 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBFD1O14562 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.65■□□□□ 0.9
UBFD1O14562 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBFD1O14562 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBFD1O14562 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UBFD1O14562 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
UBFD1O14562 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBFD1O14562 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
UBFD1O14562 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.64■□□□□ 0.89
UBFD1O14562 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBFD1O14562 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.64■□□□□ 0.89
UBFD1O14562 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.64■□□□□ 0.89
UBFD1O14562 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.64■□□□□ 0.89
UBFD1O14562 AL049796.1-201ENST00000565336 1766 ntBASIC20.64■□□□□ 0.89
UBFD1O14562 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBFD1O14562 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 AP006587.3-201ENST00000525742 1516 ntBASIC20.63■□□□□ 0.89
UBFD1O14562 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBFD1O14562 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.62■□□□□ 0.89
UBFD1O14562 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBFD1O14562 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.62■□□□□ 0.89
UBFD1O14562 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UBFD1O14562 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBFD1O14562 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBFD1O14562 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBFD1O14562 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.61■□□□□ 0.89
UBFD1O14562 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
UBFD1O14562 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.61■□□□□ 0.89
UBFD1O14562 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.61■□□□□ 0.89
UBFD1O14562 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.61■□□□□ 0.89
UBFD1O14562 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.61■□□□□ 0.89
UBFD1O14562 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBFD1O14562 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
UBFD1O14562 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBFD1O14562 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
UBFD1O14562 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBFD1O14562 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBFD1O14562 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBFD1O14562 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBFD1O14562 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBFD1O14562 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
UBFD1O14562 AC133561.4-201ENST00000566112 224 ntBASIC20.6■□□□□ 0.89
UBFD1O14562 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms