Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KRT87P-202ENST00000534226 1464 ntBASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 AC104187.1-201ENST00000607510 612 ntBASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NPIPA3F8WFD2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 KRT18P11-201ENST00000435214 1283 ntBASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 AC026185.1-201ENST00000445748 174 ntBASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 AP004607.7-201ENST00000527152 1677 ntBASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 AC139530.1-201ENST00000575312 1977 ntBASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 AC080038.3-201ENST00000623346 1952 ntBASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA3F8WFD2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 HLA-L-209ENST00000420110 1011 ntBASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 AC011767.1-201ENST00000617410 1153 ntBASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 OR7E47P-201ENST00000546390 1422 ntBASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA3F8WFD2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.33■□□□□ 0.69
NPIPA3F8WFD2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA3F8WFD2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 RAP2CP1-201ENST00000605103 478 ntBASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA3F8WFD2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA3F8WFD2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPA3F8WFD2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms