Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SMIM23A6NLE4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SMIM23A6NLE4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SMIM23A6NLE4 C17orf82-201ENST00000623772 1530 ntBASIC21.7■■□□□ 1.07
SMIM23A6NLE4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 AC104564.3-201ENST00000582367 638 ntBASIC21.7■■□□□ 1.06
SMIM23A6NLE4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM23A6NLE4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 AL031848.2-201ENST00000607670 837 ntBASIC21.69■■□□□ 1.06
SMIM23A6NLE4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM23A6NLE4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.68■■□□□ 1.06
SMIM23A6NLE4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM23A6NLE4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 AC021242.3-201ENST00000607598 1377 ntBASIC21.67■■□□□ 1.06
SMIM23A6NLE4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SMIM23A6NLE4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 FEM1AP1-201ENST00000431297 1995 ntBASIC21.66■■□□□ 1.06
SMIM23A6NLE4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 PCDHAC2-203ENST00000615316 3011 ntBASIC21.66■■□□□ 1.06
SMIM23A6NLE4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.66■■□□□ 1.06
SMIM23A6NLE4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 AL033527.3-201ENST00000566366 1196 ntBASIC21.65■■□□□ 1.06
SMIM23A6NLE4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.65■■□□□ 1.06
SMIM23A6NLE4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMIM23A6NLE4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMIM23A6NLE4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.64■■□□□ 1.06
SMIM23A6NLE4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SMIM23A6NLE4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SMIM23A6NLE4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms