Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TCAF2A6NFQ2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TCAF2A6NFQ2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCAF2A6NFQ2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 AC104187.1-201ENST00000607510 612 ntBASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TCAF2A6NFQ2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 IKBKGP1-201ENST00000612193 1073 ntBASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TCAF2A6NFQ2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 AC092437.1-201ENST00000624794 1048 ntBASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
TCAF2A6NFQ2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 AC137761.2-201ENST00000561729 223 ntBASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 EEF1DP3-203ENST00000566025 782 ntBASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 AC145350.3-201ENST00000569033 163 ntBASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 FAM99A-202ENST00000538190 1989 ntBASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 ECEL1P1-201ENST00000373592 1742 ntBASIC21.86■■□□□ 1.09
TCAF2A6NFQ2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms