Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 AC104564.3-201ENST00000582367 638 ntBASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RBFOX3A6NFN3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 AC073314.1-201ENST00000568729 2216 ntBASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBFOX3A6NFN3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
RBFOX3A6NFN3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 AL049796.1-201ENST00000565336 1766 ntBASIC16.77■□□□□ 0.27
RBFOX3A6NFN3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 MIR639-201ENST00000384974 98 ntBASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RBFOX3A6NFN3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 AC018445.3-201ENST00000624177 1945 ntBASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 AC011551.1-201ENST00000614101 683 ntBASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.75■□□□□ 0.27
RBFOX3A6NFN3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms