Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HFM1A2PYH4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HFM1A2PYH4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.74■■■□□ 2.67
HFM1A2PYH4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
HFM1A2PYH4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC31.73■■■□□ 2.67
HFM1A2PYH4 AC010542.4-201ENST00000563151 1910 ntBASIC31.73■■■□□ 2.67
HFM1A2PYH4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 AC080038.1-201ENST00000611274 1154 ntBASIC31.73■■■□□ 2.67
HFM1A2PYH4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.73■■■□□ 2.67
HFM1A2PYH4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HFM1A2PYH4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
HFM1A2PYH4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
HFM1A2PYH4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
HFM1A2PYH4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC31.72■■■□□ 2.67
HFM1A2PYH4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.72■■■□□ 2.67
HFM1A2PYH4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC31.72■■■□□ 2.67
HFM1A2PYH4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.72■■■□□ 2.67
HFM1A2PYH4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
HFM1A2PYH4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
HFM1A2PYH4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC31.72■■■□□ 2.67
HFM1A2PYH4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HFM1A2PYH4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HFM1A2PYH4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC31.71■■■□□ 2.67
HFM1A2PYH4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC31.71■■■□□ 2.67
HFM1A2PYH4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
HFM1A2PYH4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HFM1A2PYH4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
HFM1A2PYH4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
HFM1A2PYH4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.67
HFM1A2PYH4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
HFM1A2PYH4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
HFM1A2PYH4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
HFM1A2PYH4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
HFM1A2PYH4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
HFM1A2PYH4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC31.69■■■□□ 2.66
HFM1A2PYH4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
HFM1A2PYH4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
HFM1A2PYH4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
HFM1A2PYH4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HFM1A2PYH4 AC011767.1-201ENST00000617410 1153 ntBASIC31.68■■■□□ 2.66
HFM1A2PYH4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HFM1A2PYH4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HFM1A2PYH4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
HFM1A2PYH4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
HFM1A2PYH4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HFM1A2PYH4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HFM1A2PYH4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HFM1A2PYH4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
HFM1A2PYH4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC31.67■■■□□ 2.66
HFM1A2PYH4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.67■■■□□ 2.66
HFM1A2PYH4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HFM1A2PYH4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC31.67■■■□□ 2.66
HFM1A2PYH4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.66■■■□□ 2.66
HFM1A2PYH4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 DUX4L16-201ENST00000555130 1264 ntBASIC31.66■■■□□ 2.66
HFM1A2PYH4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
HFM1A2PYH4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HFM1A2PYH4 SLC7A5P1-201ENST00000568957 537 ntBASIC31.66■■■□□ 2.66
HFM1A2PYH4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
HFM1A2PYH4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
HFM1A2PYH4 AC133561.1-201ENST00000568600 2415 ntBASIC31.65■■■□□ 2.66
HFM1A2PYH4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
HFM1A2PYH4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 ID1-201ENST00000376105 1233 ntBASIC31.65■■■□□ 2.66
HFM1A2PYH4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
HFM1A2PYH4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.65■■■□□ 2.66
HFM1A2PYH4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
HFM1A2PYH4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
HFM1A2PYH4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.64■■■□□ 2.66
HFM1A2PYH4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms