Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 AC010141.3-201ENST00000456659 717 ntBASIC21.21■□□□□ 0.99
CCDC189A1A4V9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC189A1A4V9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
CCDC189A1A4V9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 AL356441.2-201ENST00000443009 864 ntBASIC21.2■□□□□ 0.98
CCDC189A1A4V9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 AC244015.2-201ENST00000616358 1861 ntBASIC21.2■□□□□ 0.98
CCDC189A1A4V9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC189A1A4V9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 AC011298.3-201ENST00000615796 283 ntBASIC21.19■□□□□ 0.98
CCDC189A1A4V9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 LETM1P2-201ENST00000597330 2178 ntBASIC21.19■□□□□ 0.98
CCDC189A1A4V9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC189A1A4V9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC189A1A4V9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 AP005435.1-201ENST00000529293 1178 ntBASIC21.17■□□□□ 0.98
CCDC189A1A4V9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 AC136469.2-201ENST00000623944 1028 ntBASIC21.17■□□□□ 0.98
CCDC189A1A4V9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 SYT6-210ENST00000641643 1587 ntBASIC21.17■□□□□ 0.98
CCDC189A1A4V9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC189A1A4V9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 OXCT2P1-201ENST00000447263 1535 ntBASIC21.16■□□□□ 0.98
CCDC189A1A4V9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC189A1A4V9 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.16■□□□□ 0.98
CCDC189A1A4V9 AL034346.1-201ENST00000568244 1277 ntBASIC21.16■□□□□ 0.98
CCDC189A1A4V9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.16■□□□□ 0.98
CCDC189A1A4V9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms