Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF103-CHMP3A0A140T963 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
RNF103-CHMP3A0A140T963 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF103-CHMP3A0A140T963 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RNF103-CHMP3A0A140T963 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF103-CHMP3A0A140T963 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF103-CHMP3A0A140T963 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF103-CHMP3A0A140T963 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF103-CHMP3A0A140T963 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF103-CHMP3A0A140T963 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF103-CHMP3A0A140T963 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 AC092171.4-201ENST00000609130 632 ntBASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF103-CHMP3A0A140T963 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF103-CHMP3A0A140T963 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF103-CHMP3A0A140T963 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 AL157384.1-201ENST00000445995 2473 ntBASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 OR2I1P-207ENST00000453522 948 ntBASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms