Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV21A0A0B4J279 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 AC026471.6-201ENST00000622954 1905 ntBASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV21A0A0B4J279 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV21A0A0B4J279 OXCT2P1-201ENST00000447263 1535 ntBASIC15.77■□□□□ 0.11
TRAV21A0A0B4J279 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV21A0A0B4J279 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV21A0A0B4J279 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV21A0A0B4J279 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV21A0A0B4J279 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 MIR3621-201ENST00000580529 85 ntBASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV21A0A0B4J279 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 AF106564.1-201ENST00000607058 2553 ntBASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV21A0A0B4J279 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV21A0A0B4J279 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms