Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC055733.4-201ENST00000638462 1354 ntBASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 BX005040.4-201ENST00000637145 1518 ntBASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 FEM1AP4-201ENST00000443167 1987 ntBASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC005224.4-201ENST00000583262 1652 ntBASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC105265.2-201ENST00000467189 838 ntBASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC009237.3-201ENST00000393279 1427 ntBASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AC012414.1-201ENST00000556676 535 ntBASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 AL024507.2-201ENST00000606070 2574 ntBASIC18.79■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 MIR6084-201ENST00000622012 110 ntBASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGKV1D-43A0A0B4J1Z2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms