Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV6A0A075B6T7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV6A0A075B6T7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV6A0A075B6T7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 AC016575.1-201ENST00000607026 382 ntBASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 GABARAPL3-202ENST00000624044 1851 ntBASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 AC022413.1-201ENST00000624602 984 ntBASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV6A0A075B6T7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 AC087393.1-201ENST00000582896 145 ntBASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV6A0A075B6T7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV6A0A075B6T7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 CA15P2-201ENST00000611168 834 ntBASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 OXCT2P1-201ENST00000447263 1535 ntBASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV6A0A075B6T7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 AP005212.1-201ENST00000581547 1997 ntBASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 LINC01529-204ENST00000636474 1715 ntBASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV6A0A075B6T7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms