Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FAM110B-201ENST00000361488 3438 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 SGSM2-211ENST00000574563 3410 ntTSL 2 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 KCNMA1-246ENST00000638848 4423 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 ETF1-201ENST00000360541 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 CSNK1G1-207ENST00000634654 2485 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
LMO3Q8TAP4 LINC00222-202ENST00000416104 1785 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 HK1-202ENST00000359426 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 CTSE-202ENST00000360218 2071 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ATP2B3-203ENST00000359149 4234 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AL139348.1-201ENST00000569070 2208 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 MARK2P13-201ENST00000419108 1849 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 C10orf128-202ENST00000374151 1971 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 DLAT-201ENST00000280346 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 PTGFR-201ENST00000370756 4450 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AL391056.1-201ENST00000443993 2449 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AC020978.10-201ENST00000623181 2704 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 WISP1-201ENST00000220856 1205 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AC092447.1-201ENST00000341855 964 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 HNRNPH1P1-201ENST00000403291 1185 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AL049748.1-201ENST00000417782 601 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AL050344.1-202ENST00000429666 614 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 OR52X1P-201ENST00000446117 914 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AP000695.2-202ENST00000454980 649 ntTSL 2 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RN7SL292P-201ENST00000473305 266 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RN7SL833P-201ENST00000498758 284 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ZFAND1-219ENST00000522520 1705 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AP000759.1-201ENST00000531086 397 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ZCRB1-205ENST00000552673 907 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 DLGAP1-218ENST00000581527 3525 ntTSL 2 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RN7SL733P-201ENST00000582253 329 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RN7SL248P-201ENST00000615117 329 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RN7SL453P-201ENST00000620275 329 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 AL359644.1-201ENST00000635872 471 ntTSL 3 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 MYO7A-211ENST00000620575 4016 ntTSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 PXYLP1-202ENST00000393010 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LMO3Q8TAP4 ZSWIM5P1-201ENST00000420606 1970 ntBASIC12.07□□□□□ -0.48
LMO3Q8TAP4 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 CDKL1-201ENST00000216378 2209 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ANXA2R-201ENST00000314890 2234 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 Z95114.4-201ENST00000623420 3578 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 PSMD1-203ENST00000409643 2901 ntTSL 5 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 GINS3-202ENST00000328514 1932 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 AL035252.3-201ENST00000613361 2784 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ECM2-204ENST00000444490 2648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 CD3D-201ENST00000300692 861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 SFTA2-201ENST00000359086 451 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 MCOLN3-202ENST00000370587 2953 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 MIR194-2-201ENST00000384864 85 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 U3.49-201ENST00000391065 214 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 TMEM91-204ENST00000413014 650 ntTSL 2 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 AC012074.1-202ENST00000431557 419 ntTSL 3 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 AC092447.4-201ENST00000436042 673 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 AC010442.2-201ENST00000509301 407 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 IGKV1-13-201ENST00000521705 347 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 AC008738.2-201ENST00000593041 404 ntTSL 5 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 MIR6893-201ENST00000613458 69 ntBASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ADAMTS9-AS1-215ENST00000626014 844 ntTSL 5 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 ALS2-206ENST00000467448 2677 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 CTXN3-202ENST00000395322 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 TMEM108-202ENST00000393130 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 PLA2G6-201ENST00000332509 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms