Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHB13Q9Y5F0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB13Q9Y5F0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
PCDHB13Q9Y5F0 AC026471.6-201ENST00000622954 1905 ntBASIC23.55■■□□□ 1.36
PCDHB13Q9Y5F0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHB13Q9Y5F0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 TPRG1LP1-201ENST00000598702 760 ntBASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHB13Q9Y5F0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 AC055733.4-201ENST00000638462 1354 ntBASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PCDHB13Q9Y5F0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHB13Q9Y5F0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 AC010542.4-201ENST00000563151 1910 ntBASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHB13Q9Y5F0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 AC104564.3-201ENST00000582367 638 ntBASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 AC019069.1-201ENST00000610008 1333 ntBASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 AC003102.1-202ENST00000563394 1796 ntBASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHB13Q9Y5F0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 AC123595.1-201ENST00000440769 1046 ntBASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB13Q9Y5F0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
PCDHB13Q9Y5F0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB13Q9Y5F0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms