Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHB7Q9Y5E2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 AC137767.1-201ENST00000602918 1920 ntBASIC23.06■■□□□ 1.28
PCDHB7Q9Y5E2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 CYP2T1P-201ENST00000432607 1285 ntBASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 AC007322.4-201ENST00000509611 723 ntBASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 MIR4758-201ENST00000577688 71 ntBASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB7Q9Y5E2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 AC008694.1-202ENST00000636953 945 ntBASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB7Q9Y5E2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 AC087742.1-201ENST00000575880 1738 ntBASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 MKRN4P-201ENST00000444706 1521 ntBASIC23.03■■□□□ 1.28
PCDHB7Q9Y5E2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 FAM201B-201ENST00000458407 597 ntBASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 OR10C1-204ENST00000622521 1039 ntBASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.02■■□□□ 1.28
PCDHB7Q9Y5E2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 MIPEPP3-201ENST00000412105 444 ntBASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 POU5F1P4-201ENST00000413175 1085 ntBASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 AC098934.4-201ENST00000564127 592 ntBASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 MIR4651-201ENST00000582622 73 ntBASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 AC069236.1-201ENST00000604339 616 ntBASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB7Q9Y5E2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB7Q9Y5E2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms