Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 GUSBP5-201ENST00000418136 578 ntBASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TRAF6Q9Y4K3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRAF6Q9Y4K3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 AL512631.2-201ENST00000604634 923 ntBASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF6Q9Y4K3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.7■□□□□ 0.91
TRAF6Q9Y4K3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 AL034346.1-201ENST00000568244 1277 ntBASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRAF6Q9Y4K3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF6Q9Y4K3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms