Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.45■□□□□ 0.7
TPRKBQ9Y3C4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TPRKBQ9Y3C4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPRKBQ9Y3C4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPRKBQ9Y3C4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 MIR7108-201ENST00000614319 87 ntBASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPRKBQ9Y3C4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 C17orf82-201ENST00000623772 1530 ntBASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
TPRKBQ9Y3C4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 KRT18P24-201ENST00000344739 1156 ntBASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.42■□□□□ 0.7
TPRKBQ9Y3C4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 AL049796.1-201ENST00000565336 1766 ntBASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TPRKBQ9Y3C4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms