Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF1Q9UH73 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
EBF1Q9UH73 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.75■■□□□ 1.07
EBF1Q9UH73 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF1Q9UH73 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
EBF1Q9UH73 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EBF1Q9UH73 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 AP001160.3-201ENST00000601484 763 ntBASIC21.74■■□□□ 1.07
EBF1Q9UH73 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 AC066615.1-201ENST00000640911 628 ntBASIC21.74■■□□□ 1.07
EBF1Q9UH73 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.74■■□□□ 1.07
EBF1Q9UH73 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF1Q9UH73 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 AC073210.2-201ENST00000430369 194 ntBASIC21.73■■□□□ 1.07
EBF1Q9UH73 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.73■■□□□ 1.07
EBF1Q9UH73 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.73■■□□□ 1.07
EBF1Q9UH73 AL138781.1-201ENST00000566567 1274 ntBASIC21.73■■□□□ 1.07
EBF1Q9UH73 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
EBF1Q9UH73 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF1Q9UH73 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF1Q9UH73 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EBF1Q9UH73 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF1Q9UH73 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF1Q9UH73 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF1Q9UH73 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF1Q9UH73 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
EBF1Q9UH73 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.71■■□□□ 1.07
EBF1Q9UH73 ANOS2P-203ENST00000472227 1816 ntBASIC21.71■■□□□ 1.07
EBF1Q9UH73 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
EBF1Q9UH73 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EBF1Q9UH73 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.71■■□□□ 1.07
EBF1Q9UH73 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
EBF1Q9UH73 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.71■■□□□ 1.07
EBF1Q9UH73 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EBF1Q9UH73 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
EBF1Q9UH73 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
EBF1Q9UH73 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EBF1Q9UH73 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EBF1Q9UH73 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 AC069152.1-201ENST00000438030 544 ntBASIC21.7■■□□□ 1.06
EBF1Q9UH73 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EBF1Q9UH73 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 AC133552.2-202ENST00000575694 574 ntBASIC21.7■■□□□ 1.06
EBF1Q9UH73 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EBF1Q9UH73 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 AC133041.1-202ENST00000642053 222 ntBASIC21.7■■□□□ 1.06
EBF1Q9UH73 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.7■■□□□ 1.06
EBF1Q9UH73 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EBF1Q9UH73 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
EBF1Q9UH73 AL024507.2-201ENST00000606070 2574 ntBASIC21.69■■□□□ 1.06
EBF1Q9UH73 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 KRT18P20-201ENST00000548986 1279 ntBASIC21.69■■□□□ 1.06
EBF1Q9UH73 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
EBF1Q9UH73 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.69■■□□□ 1.06
EBF1Q9UH73 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
EBF1Q9UH73 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EBF1Q9UH73 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
EBF1Q9UH73 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EBF1Q9UH73 CNN2P6-201ENST00000439038 900 ntBASIC21.68■■□□□ 1.06
EBF1Q9UH73 AF201337.1-201ENST00000520239 748 ntBASIC21.68■■□□□ 1.06
EBF1Q9UH73 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.68■■□□□ 1.06
EBF1Q9UH73 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.68■■□□□ 1.06
EBF1Q9UH73 AC055733.4-201ENST00000638462 1354 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms