Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NIPSNAP3AQ9UFN0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NIPSNAP3AQ9UFN0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 UNC93B8-201ENST00000511903 705 ntBASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPSNAP3AQ9UFN0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NIPSNAP3AQ9UFN0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 SLC25A24-204ENST00000569674 2357 ntBASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPSNAP3AQ9UFN0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPSNAP3AQ9UFN0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 AC099791.2-201ENST00000605725 427 ntBASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NIPSNAP3AQ9UFN0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms