Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAP1Q9NZP6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAP1Q9NZP6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAP1Q9NZP6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPAP1Q9NZP6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.33■□□□□ 0.68
NPAP1Q9NZP6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAP1Q9NZP6 AF106564.1-201ENST00000607058 2553 ntBASIC19.33■□□□□ 0.68
NPAP1Q9NZP6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 AC010525.1-201ENST00000585559 441 ntBASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAP1Q9NZP6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 RARRES2P6-201ENST00000567333 442 ntBASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAP1Q9NZP6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 AC126544.1-201ENST00000580842 1059 ntBASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAP1Q9NZP6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 AC005229.4-201ENST00000610085 2198 ntBASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAP1Q9NZP6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 AC026271.2-201ENST00000428091 497 ntBASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 OR2I1P-207ENST00000453522 948 ntBASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAP1Q9NZP6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 AL353803.4-201ENST00000565882 1934 ntBASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.27■□□□□ 0.68
NPAP1Q9NZP6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms