Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SLC52A1Q9NWF4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 RPS2P52-201ENST00000469610 820 ntBASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 AC008175.2-201ENST00000612840 297 ntBASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 AC120498.10-201ENST00000621827 505 ntBASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SLC52A1Q9NWF4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 POU5F1P4-201ENST00000413175 1085 ntBASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 AC097658.1-201ENST00000475555 843 ntBASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
SLC52A1Q9NWF4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SLC52A1Q9NWF4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.89■■■□□ 2.54
SLC52A1Q9NWF4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.89■■■□□ 2.54
SLC52A1Q9NWF4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SLC52A1Q9NWF4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SLC52A1Q9NWF4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SLC52A1Q9NWF4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.89■■■□□ 2.53
SLC52A1Q9NWF4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 DUSP5P2-201ENST00000426873 1033 ntBASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 GCSHP5-201ENST00000443090 522 ntBASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.88■■■□□ 2.53
SLC52A1Q9NWF4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 ESRRAP1-201ENST00000400596 1257 ntBASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 AC091874.3-201ENST00000512672 1195 ntBASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SLC52A1Q9NWF4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 RBM17P2-201ENST00000616397 1405 ntBASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SLC52A1Q9NWF4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 KRT16P2-201ENST00000414673 1423 ntBASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 AL591742.1-201ENST00000604433 565 ntBASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.85■■■□□ 2.53
SLC52A1Q9NWF4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 AC010980.2-201ENST00000587099 1412 ntBASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 AC243732.1-201ENST00000612648 864 ntBASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC52A1Q9NWF4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
SLC52A1Q9NWF4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms