Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CBX8Q9HC52 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.82■■□□□ 1.4
CBX8Q9HC52 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.82■■□□□ 1.4
CBX8Q9HC52 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CBX8Q9HC52 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 AC133637.1-201ENST00000624115 1537 ntBASIC23.81■■□□□ 1.4
CBX8Q9HC52 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CBX8Q9HC52 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.81■■□□□ 1.4
CBX8Q9HC52 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.81■■□□□ 1.4
CBX8Q9HC52 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.81■■□□□ 1.4
CBX8Q9HC52 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CBX8Q9HC52 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.81■■□□□ 1.4
CBX8Q9HC52 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CBX8Q9HC52 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CBX8Q9HC52 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CBX8Q9HC52 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.79■■□□□ 1.4
CBX8Q9HC52 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CBX8Q9HC52 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CBX8Q9HC52 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CBX8Q9HC52 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.78■■□□□ 1.4
CBX8Q9HC52 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.78■■□□□ 1.4
CBX8Q9HC52 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
CBX8Q9HC52 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CBX8Q9HC52 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CBX8Q9HC52 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.77■■□□□ 1.4
CBX8Q9HC52 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CBX8Q9HC52 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CBX8Q9HC52 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CBX8Q9HC52 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CBX8Q9HC52 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CBX8Q9HC52 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.76■■□□□ 1.39
CBX8Q9HC52 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CBX8Q9HC52 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms