Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SND1-IT1Q9HBX3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 DUX4L4-201ENST00000566884 1269 ntBASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 HCG11-201ENST00000411553 5696 ntBASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SND1-IT1Q9HBX3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 MIR4508-201ENST00000584178 70 ntBASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SND1-IT1Q9HBX3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SND1-IT1Q9HBX3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SND1-IT1Q9HBX3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SND1-IT1Q9HBX3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SND1-IT1Q9HBX3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SND1-IT1Q9HBX3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 AC004687.1-201ENST00000579003 1625 ntBASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms